Xanthomonas citri subsp. citri Aw12879: XCAW_04158
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Entry
XCAW_04158 CDS
T02519
Symbol
kdtA
Name
(GenBank) 3-Deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00540
Lipopolysaccharide biosynthesis
xci01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XCAW_04158 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xci01005
]
XCAW_04158 (kdtA)
Enzymes [BR:
xci01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
XCAW_04158 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
XCAW_04158 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
XCAW_04158 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
XCAW_04158 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
xci01005
]
Lipid A
XCAW_04158 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_1_2
Glycos_transf_1
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AGI09923
LinkDB
All DBs
Position
complement(4674847..4676163)
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AA seq
438 aa
AA seq
DB search
MRKDPIEWLLRGLYSALLYLLLPVTVYHLVWRGFRVREYFNRWNERYASYTHACGRPRVW
VHAVSVGEVNAAAPLVNALRAQRPDIRWVITTITPTGSERVRALWGDAVDHVYLPYDVPG
SVGRFLEHFRPRLALILETELWPNMLFGCRDRQIPVYILNARLSARSLRGYRLLAPLISR
ALRTVTCVAAQSQDDAERFVTLGARPDQVIALGNLKFDIAAPAQLQALVAQFRMHVPATR
PVWIAASTHEGEEAAVADIHARVLLQFPDLLLLWAPRHPERFPKVETLARERGWRVATRK
TQQWPQAGDKVFVIDTLGELMSFYACAQVAFVGGSLQPIGGHNLLEPAAVGTPAITGPHL
HNFSEISRRMRQADAVAICEDAECVYQALARLLADPAQREAMAAAGLALVANGKGAVTRT
LVRIAPDLPPLANEGVAA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagatccgatcgaatggctgttgcgcgggctgtactcggcgctgctctacttg
ttgttgccggtcacggtgtaccacctggtatggcgtggctttcgcgtgcgcgaatacttc
aatcgctggaacgagcggtatgcgtcctacacgcatgcctgcgggcggccacgggtatgg
gtgcacgcggtgtcggtgggcgaggtcaacgcggccgcgccgctggtcaacgcgctacgt
gcgcagcgcccggatatccgttgggtcatcaccaccatcacccctaccggctccgagcgc
gtgcgcgcgctgtggggcgatgcggtggaccatgtgtacctgccctacgacgtacccggc
agcgtggggcggtttctcgaacacttccgcccgcgccttgcgttgatcctggaaaccgag
ctgtggccgaacatgttgttcggctgccgcgatcgccagattccggtgtacatcctcaat
gcgcggttgtcggcgcgttcgttgcgcggctatcggttgctggcaccgttgatcagtcgt
gcgctgcgcaccgtcacctgcgtggcggcgcagtcgcaggacgatgccgagcggttcgtc
accctgggcgcgcgcccggatcaggtgatcgcgttgggcaatctcaagttcgatatcgcc
gcgccggcgcaattgcaggcgttggtcgcgcagttccgcatgcacgtgccggccacgcgc
ccggtgtggatcgccgccagcacgcacgaaggcgaagaggcggccgtcgccgatatccac
gcacgtgtgctgctgcaatttccggacttgctgctgttgtgggcgccgcgccatcccgag
cgctttcccaaggtcgagacattggcacgcgagcgcggttggcgcgttgccacgcgcaag
acccagcaatggccgcaggcaggcgacaaggtattcgtcatcgacaccctgggcgagctg
atgagcttctatgcgtgcgcgcaggtggctttcgtcggtggcagcttgcagccaattggc
ggacacaacctgctcgagccggccgccgtcggcacgccggcaatcactggcccgcatctg
cataacttctcggagatttcgcggcgcatgcgccaagccgatgccgttgccatctgcgag
gatgccgagtgcgtctaccaggcgttggcgcgcctgctcgccgaccccgcacaacgcgag
gcgatggccgctgcgggcctggcgctggtcgccaatggcaagggcgccgtgacccgcaca
ttggtgcggatcgctcccgatctgccgccgctggcgaacgagggcgttgcggcgtga
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