Xanthomonas citri subsp. citri Aw12879: XCAW_04203
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Entry
XCAW_04203 CDS
T02519
Symbol
rhgB
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XCAW_04203 (rhgB)
Enzymes [BR:
xci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
XCAW_04203 (rhgB)
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
Motif
Other DBs
NCBI-ProteinID:
AGI09968
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Position
4729399..4731000
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AA seq
533 aa
AA seq
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MPRNRPHTFACALLLYAGVSAPALADFGISRSGDRVIVDSGAELVFAVDARNGDIVSMRY
RDNELQTTESKGSHIASGLGSASVDARIVGGTIVVSAKAGDLVQYYIARKGRNAIYMATD
APSLMPVGELRFVARLNVSTLPNAQQEPDSNVGKAIEGNDVFLLPDGRTSSKFYSARRMM
DDQVHGVSGSGVAVFMLTGNRERSAGGPFFKDIATQKTSVTHELYHYMYSDHTQTEAFRG
GLHGVYGLLFTDGSSPSSAQLDTAFVDATLGLSGYLPASGRGTVSGHVGGVLPGQPAVIG
LRNAQAQYWATADGSGDYRVTGVRPGSYRMTLYQNELDVAQRNIEVSAGATAHAALQAVV
LPGTVKWQIGIPDGTPAGFRYADLLPRAHPSDARMHWSAVTYTVGSSSLSSFPAVQWRGI
NTPSRIDFTLPANEVRGYRLRIFVPLAQGSARPQISVNARWNGSVPAAPTQPKTRGITRG
TARGNNTLYEVDIPASALHAGNNRIEIGIASGSPDNGYLSPAIVFDSIQLVAL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgcaatcgtccacataccttcgcctgcgcgctgctgctctatgccggcgtcagc
gcacctgcgctggccgacttcgggatcagccgcagcggcgaccgcgtgatcgtcgacagc
ggcgccgagctggtgtttgcggtcgatgcccggaatggcgacatcgtctcgatgcgctat
cgcgacaacgaactgcagaccaccgaatcgaagggctcgcacatcgcttcggggctgggc
agtgccagtgtggatgcacgcatcgttggcgggacgatcgtggtgtcggccaaggccggc
gacttggtccagtactacatcgcgcgcaagggccgcaacgcgatctacatggccaccgat
gcgccaagcttgatgccggtgggcgaattgcgcttcgtcgcccgcttgaacgtgtccacg
ttgccgaatgcgcagcaggagcccgattccaatgtcggcaaagcgatcgaaggcaacgat
gtctttctattgccggatgggcgcaccagttccaagttctattccgcccgtcgaatgatg
gacgaccaggtgcatggcgtcagcggctctggcgttgccgtgttcatgctgacgggcaac
cgcgagcgcagcgcgggcggcccgttcttcaaggacatcgcgacacagaaaaccagcgtg
acgcatgagctctatcactacatgtattccgatcacacccagaccgaagcgtttcgcggc
ggcctgcacggtgtgtacgggctgctgttcaccgatgggagctcgccgtcgagtgcgcaa
ctggacaccgccttcgtcgatgccacgctgggcctgagcggttatttgccggcaagcggg
cgcggcaccgtgagcgggcacgtcggcggcgtgttgccgggccagccggccgtcatcggt
ctgcgcaatgcgcaggcgcagtactgggccactgccgacggcagcggcgactaccgggtg
acgggtgttcgcccgggcagctatcgcatgacgctctaccagaacgaactagacgtcgca
caacgcaacatcgaggtttccgccggcgccactgcgcacgccgcactgcaggcagtcgtt
ttgccgggcacggtgaagtggcagatcggcattcccgatggcacgccggcagggttcaga
tatgcggacctgttaccgcgggcgcacccttccgatgcgcgcatgcactggtctgcggtg
acctacaccgtgggatcgagcagcctgagcagctttccggcggtgcagtggcgcggcatc
aacaccccgagccggatcgacttcaccctgcccgccaacgaggtgcgcggctatcgcctg
cgtatcttcgtgccgttggcacagggcagcgcacgtccgcagatcagcgtgaatgcacgc
tggaacggctcggtgcctgccgcgcccacgcagccaaagacacgcggcatcacgcgcggc
actgcgcgtggcaacaacaccctgtacgaagtggacatccccgcctctgccttgcatgcc
ggcaacaaccgcatcgagatcggcattgcctccggctccccggacaacggttacctcagc
ccggcaatcgtgttcgacagcatccagctggtagcgttatag
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