Xanthomonas citri subsp. citri Aw12879: XCAW_04557
Help
Entry
XCAW_04557 CDS
T02519
Symbol
rfaL
Name
(GenBank) Lipid A core - O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00540
Lipopolysaccharide biosynthesis
xci01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XCAW_04557 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xci01005
]
XCAW_04557 (rfaL)
Enzymes [BR:
xci01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
XCAW_04557 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
xci01005
]
Core region
XCAW_04557 (rfaL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
TraS
Motif
Other DBs
NCBI-ProteinID:
AGI10320
LinkDB
All DBs
Position
complement(5098977..5100254)
Genome browser
AA seq
425 aa
AA seq
DB search
MNSLRTQPASLSPSAQTTSRAGVRIAELGVFVLTALVVSMPSGLLPFGLCLLLGSLIGWR
SLRDGIAAREWSLRVVGWLTVAVIAMSLLSIALFEHGLRDVGNRSRFLVLPWAALWAYAL
QPRQLWLWRGALAGVFAAMLIALLQVMNGADRAEGFTNAIVFADIALMLLLVVVFCRPPG
NVRWLVGAAVATVAVIVLSGSRGVWLALLATLGVLIWGAPWHSTRMRLLTFIGSAVLAMG
VVLSVPGLTDQMRLGELQSDLQRYEVGDSDSSAGARIERLHVAWDTVKAHPLTGVGVGRF
DDAMQDLPACAADPALVRCHLGHAHNDLAEWGATQGVPGLLLLLAVYGVPLWLFVRLHRR
SGQKQFRGPAAAGVMIVISYALCGLTQSMFAHQVAASFYTATLGVLVGLSARQAQQTELA
ATIAR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaattccttgcgtacccagcccgcatcgctttcgccgtctgctcagaccacatcgcgg
gcaggcgtgcgcattgccgagctgggcgtgttcgtgttgaccgcgctggtggtcagcatg
ccgagcgggctgctgccgttcggcctgtgcctgttgcttggttcgctgatcggctggcgc
agcctgcgcgacggcattgctgcgcgcgaatggtcgttgcgcgtggtgggctggctgacc
gtggcggtgattgcgatgtcgctgctgtcgatcgccttgttcgaacatgggctgcgcgat
gtgggcaaccgctcgcgcttcctggtactgccgtgggcggcgctatgggcctatgcattg
cagccgcgccagctctggctgtggcgtggcgcgctagccggcgtgttcgcggcgatgttg
attgcgttgttgcaggtgatgaacggcgccgaccgcgcggaaggcttcaccaacgcgatc
gtgtttgccgacattgcgctgatgttgctgctggtggtggtgttctgtcgcccgcccggc
aatgtgcgttggctagtgggcgctgcggtcgccacggtggcggtgatcgtgctcagtggc
agccgcggggtctggttggcattgctggcgacgctgggcgtgctgatctggggcgcgccg
tggcacagcacgcgcatgcgcttgctcaccttcatcggcagcgcggtgctggcgatgggt
gtggtgctcagcgtgccggggctgaccgatcagatgcgcctgggcgaattgcagagcgac
ctgcaacgttacgaagttggcgatagcgattcgtcggccggtgcccgcatcgaacgcttg
cacgtggcctgggataccgtgaaggcgcatccgctgaccggtgtaggcgttggccgtttc
gacgatgcgatgcaggacctgccggcctgtgccgccgatccggcattggttcgctgtcat
ctgggacatgcacacaacgatctggccgaatggggggcaacccagggtgtgcccgggctg
ttgctgctgcttgccgtctacggcgtgccgctgtggctattcgtgcgcctgcatcggcgc
agtggacagaaacagttccgtggcccggccgcagccggggtgatgatcgtgatcagttat
gccttgtgcgggctgacccagtcgatgttcgcgcatcaggtggcggcaagcttctacacg
gccacgctcggcgtgctggtgggtctatcggcgcggcaggcgcagcagaccgagctcgct
gcgacaatcgctcgctag
DBGET
integrated database retrieval system
