Xanthomonas citri subsp. citri Aw12879: XCAW_04584
Help
Entry
XCAW_04584 CDS
T02519
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase sigma subunit
KO
K03089
RNA polymerase sigma-32 factor
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xci03021
]
XCAW_04584 (rpoD)
Transcription machinery [BR:
xci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XCAW_04584 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
HTH_11
KORA
HTH_10
UCR_14kD
HTH_3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AGI10347
LinkDB
All DBs
Position
complement(5130897..5131781)
Genome browser
AA seq
294 aa
AA seq
DB search
MVPMNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQDLARRFRDELDLDAA
RELVHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIR
AEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVME
MESRLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMA
GLDARSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctatgaaccagactacctcgactgcccttgtggcaaacaatctcccgattccc
agtgcgctcggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcg
gtcgatgaggagcaggatctggcccgtcgctttcgcgacgagctggatctggacgccgcg
cgcgaactggtccattcccacctgcgcttcgtggtgcacgtggcccgcggctacaacggc
tacggcctgccgctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtc
aagcgcttcgacccggacatgggcgtgcgcctggtcagcttcgcggtgcactggatccgt
gccgagatgcacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgaccaag
gcgcagcgcaaactgttcttcaacctgcgcaagtccaagacgcgtctgggctggctcaat
gcgtcggaagtgactgcggttgccaaggacctgaacgtctccgagcgtgaggtgatggaa
atggagtcgcgcctgtccggtcgcgacatcggtttcgacgcgtcgtcggacgaagacgac
gatcacggcccgccgtcgccggtgagctacctggtcgccaatgaagaagatccgtcgcag
gcgtacgagcgtcacgacagcgaagacaaccagctgcagctgctgcgcgaaggtatggct
ggcctggacgcgcgctcgcgcgacatcgtcaagcgccgctggctggattccgattccaag
gtgacgctgcaggaactggcagacgaatacggcgtgtcggccgagcgcatccgtcagatc
gaagcgaatgcgctgaagaagatgaaggcgctgttcgtcgcctga
DBGET
integrated database retrieval system
