Xanthomonas citri subsp. citri Aw12879: XCAW_04742
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Entry
XCAW_04742 CDS
T02519
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xci03016
]
XCAW_04742 (thdF)
Transfer RNA biogenesis [BR:
xci03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
XCAW_04742 (thdF)
Prokaryotic type
Methyltransferases
XCAW_04742 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AAA_28
MCM
ABC_tran
AIG1
HflX_C
AAA_21
Ras
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGI10500
LinkDB
All DBs
Position
complement(5314646..5315986)
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AA seq
446 aa
AA seq
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MSSSTSTIVAIASAAGIGGVGIVRLSGPQSVQIAAHLGIARMQPRHAHYARFRDGHGAVI
DDGIALWFNAPHSFTGEDVVELQGHGSPVLLRQLVARCIELGARQARAGEFSERAFLNGK
LDLAQAEAIADLIAAGDLRAARAARRALDGVFSQRVDALAETLTRLRIHVEAAIDFADEP
LDTLGGNQVRDGLGQARNVLAQLLRDAERGRKLRDGLHAVLIGPPNAGKSSLLNALAGSD
RAIVTDVAGTTRDTLHEAIQLDGFELTLVDTAGLRDGGDAIEREGMRRARAELERADLAL
VVLDARDPQAARDAIGDAIDTVPRQLWIHNKCDLLGNAASLDANAIAVSAVTGQGLEQLH
IRLRALALGDGVDSVDGEFSARTRHVQALRRAEQHADAADLELGFEQLELAAEELRLAHE
ALGEITGKLSADDLLGKIFSSFCIGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttccacctcgaccatcgttgccatcgccagtgctgccggaatcggcggcgtg
ggcatcgtgcgcttgtccgggccgcagtcggtgcagatcgcagcgcacctcggaattgcg
cggatgcagccgcggcatgcgcactacgcgcgttttcgcgatgggcacggcgccgtcatc
gacgatggcattgcgctgtggttcaacgcgccgcacagcttcaccggcgaagatgtcgtc
gagctgcaaggtcatggcagcccggtgctgttgcggcaactggttgcccgctgcatcgaa
ctgggtgcacgtcaggcacgcgccggcgaattcagcgaacgtgcgtttctcaacggcaag
ctcgatcttgcgcaggccgaggccattgccgacttgatcgcggccggcgacctgcgggcg
gcacgcgccgcgcggcgcgcactggacggcgtgttttcgcaacgggtcgatgcactggcc
gagaccctgacgcgcctgcgtatccatgtcgaggcagccatcgactttgccgatgagccg
ctcgacaccttgggcggcaatcaagtacgcgatggtctgggtcaggcgcgcaacgtgctc
gcacagctgctgcgcgatgccgaacgcgggcgtaagttgcgcgacggcctgcatgcggtg
ttgatcggtccgcccaatgccggcaagagttccctgctcaatgcgctggccggaagcgac
cgcgcaatcgtcaccgatgttgccggcaccacccgcgacaccttgcacgaagccatccag
ctggacggtttcgagttgaccttggtcgataccgccggcctgcgcgatggcggcgatgcg
atcgaacgcgaaggcatgcgccgcgcacgcgccgaactggagcgcgccgacctggcgctg
gtggtgctggatgcacgcgacccgcaggccgcccgcgatgccatcggcgatgccatcgac
acggtgccgcgtcagctatggatccacaacaaatgcgatctgctcggcaatgccgcatcg
ctcgatgccaatgcgatcgctgtctctgccgtgaccggacaaggactggagcaattgcac
atccgcctgcgcgcgcttgcgctcggcgatggcgtggacagcgtcgacggcgagttctct
gctcgcacgcggcatgttcaggcgctgcgtcgcgccgaacagcacgccgatgctgccgat
ctggagctcggtttcgaacaactggaactggctgccgaagaactgcgtctggcacatgaa
gcgctcggcgagatcaccggaaagctcagcgccgacgacctgctcggcaagatcttctcg
agtttttgcatcggcaagtga
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