Xanthomonas citri subsp. citri UI6: J158_01120
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Entry
J158_01120 CDS
T03894
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J158_01120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcj03021
]
J158_01120
03400 DNA repair and recombination proteins [BR:
xcj03400
]
J158_01120
Enzymes [BR:
xcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J158_01120
Transcription machinery [BR:
xcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J158_01120
DNA repair and recombination proteins [BR:
xcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J158_01120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AJY85540
LinkDB
All DBs
Position
1147783..1148781
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATLSLSKQGPGTVTAADIRTDHN
VEIINGDHVICHLTKDTALNMRLKIERGFGYQPAAARRRPDEETRTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtggtccgcagatcgaacgtcttacc
gacaaccgtgccaaggtcgtgatcgagcccttggagcgcggttacgggcacacgttgggc
aatgccctgcgtcgtgtgttgttgtcgtcgatccccggttttgcgatcaccgaggtcgag
atcgacggtgtgctccacgagtacaccacggtcgaaggtctgcaggaagacgtgctcgac
gtcctgctgaacctgaaagacgtggcgattcgtatgcacagtggcgatagcgccacgctg
tcgttgtccaagcagggtccgggtacggtcactgcggcagacatcaggaccgatcacaac
gtcgagatcatcaacggcgaccacgtgatctgccatctgaccaaggacacggcgctgaac
atgcgcctcaagatcgagcgcggtttcggctatcagccggctgctgcgcgtcgtcgtccg
gacgaagagacccgcaccatcggtcgtctgatgctggatgcgtcgttctcgcccgtgcgt
cgcgttgcctacgccgtggaagctgcgcgtgttgaacagcgcaccgacctcgacaagctg
gtgatcgatatcgaaaccaacggcacgatcgatgcagaggaagccgtgcgcaccgccgcc
gacatccttagcgatcagctgtcggtgttcggcgatttcacccaccgcgatcgcggtgcg
gccaagccggctgccagcggcgtggatccggtgctgctgcgtccgatcgacgacctcgag
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatctactacatcggcgatttg
atccagaagaccgaagtcgagctgctcaagaccccgaatctgggcaagaagtcgctgacc
gaaatcaaggaagtgctggcgcagcgcggcctcgctctgggcatgaagctggagaactgg
ccgccggccggtgtcgcccagcacggcatgcttggttaa
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