Xanthomonas citri subsp. citri UI6: J158_01402
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Entry
J158_01402 CDS
T03894
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
xcj
Xanthomonas citri subsp. citri UI6
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcj03400
]
J158_01402
DNA repair and recombination proteins [BR:
xcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J158_01402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
AAA_16
GvpD_P-loop
Lon_C
AAA_22
DUF7125
SLFN-g3_helicase
AAA_24
PAXNEB
nSTAND3
AAA_30
Rad51
AAA
GvpD_bR2
RecA
MCM
DAP3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AJY85807
LinkDB
All DBs
Position
1442154..1443545
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AA seq
463 aa
AA seq
DB search
MAKAKTAYVCGECGAEYTKWQGQCTECGVWNTLSEIVLESATPGGKTSPAASRRSGWAGK
AEAPKITALKDVQQSEQARVSTGIGEFDRVLGGGLVEGAVVLIGGDPGIGKSTLLLQALA
SMASTLPVLYVTGEESLAQVAGRAVRLDLPLEGLNALAETGIENILQHASVARPKLIVAD
SVQTLWTESLTAAPGSVSQVRESAARLVRYAKETGTAVFLVGHVTKEGGIAGPRVLEHMV
DAVLYFEGESGSRFRLLRAFKNRFGAVNELGVFAMGEKGLKEVSNPSAIFLSGGSTQQPG
SCVMVTREGTRPLMVEVQALVDASPLSNPRRVAVGLEQNRLAMLLAVLHRHGGIVVGDQD
VFVNVVGGIRVQETAADLPVLLAVLSSLRDRPLSEKTIAFGEVGLSGEIRPVPNGEDRLK
EAATHGFKRAIVPRANAPKTTSIKGMEIIAVERLSQALEAAAD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgaaaacggcctatgtctgcggcgagtgcggtgccgagtacaccaagtgg
caggggcagtgcaccgaatgcggtgtctggaacacgctgagcgaaatcgtgctcgaaagc
gccaccccgggcggcaagacatcgccagcggcatcgcggcgtagcggctgggccggcaag
gccgaggcacccaagatcactgcgctcaaggacgtgcagcagtccgagcaggcgcgcgtc
tccaccggtatcggcgagttcgatcgggtgctgggtggcgggctggtggaaggggcggtg
gtgctgatcggcggcgacccagggatcggcaagtcgacgttgctgctgcaggcgctggcg
agcatggcctccacgttgccggtgttgtatgtgaccggcgaggaatcgctggcccaggtg
gccgggcgcgcggtgcgcctggatctgccgctggaaggcctgaacgccctggccgaaacc
ggcatcgaaaacatcctgcagcacgccagcgtggcccggccgaagctgatcgtggccgat
tcggtacaaaccttgtggaccgagtcgttgaccgcagcgccgggctcggtgagccaggtg
cgcgagagcgcagcgcggctggtgcgctatgccaaggaaaccggcaccgcggtgtttctg
gtcggccatgtgaccaaggaaggcggcatcgccgggccacgcgtgctcgagcacatggtc
gatgcggtgctgtatttcgaaggcgagagcggcagccggttccgcctgctgcgtgcgttc
aagaaccgcttcggtgcggtcaacgaactgggcgtgttcgccatgggcgagaagggcctc
aaggaggtctccaacccgtcggcgatcttcctgtccggcggtagcacccagcagccgggc
agttgcgtgatggtcacccgcgaaggcacccgcccgctgatggtggaggtacaggcgctg
gtggatgcatcgccgttgtccaacccacgccgggttgcggtgggtctggagcagaaccgg
ctggcgatgttgctggcggtactgcatcgccatggcggtatcgtggtgggcgaccaggac
gtgttcgtcaatgtggtgggcggcatccgcgtgcaggaaaccgcggccgatttgccggtg
ctgctggcagtgctgtcgtcgctgcgcgaccggccgctgtccgaaaagaccatcgcgttc
ggcgaagtggggctgtctggcgaaatccgcccggtgcccaatggcgaggaccgcctgaag
gaagcagcgacccatggtttcaagcgtgccatcgtgccccgcgccaatgcgcccaagacc
accagcatcaagggcatggaaatcattgcggtggagcgcttgagccaggcattggaagcg
gcggcggactga
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