Xanthomonas citri subsp. citri UI6: J158_01507
Help
Entry
J158_01507 CDS
T03894
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcj03016
]
J158_01507
Enzymes [BR:
xcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
J158_01507
Transfer RNA biogenesis [BR:
xcj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
J158_01507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJY85912
LinkDB
All DBs
Position
1573282..1573884
Genome browser
AA seq
200 aa
AA seq
DB search
MKQQFLYLSSAEAQLSLGLGEEKTTERLFFAVMADAPTAEHAARIADGLLRGGHAEGKPL
ARERLHVTLHHLGDYAGGLPPSLVSRASQAATRVQMDAFAVEFDRVGTFGGRRSQLPCVL
RGEEQVRGLYELQGALGRQLAHVGIAGDAQYTPHMTLLYCNQAVPQRRCDALAWTVRDFA
LVRSFLGQSRYQIEGRWSLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacagttcctgtacctgtcatcggccgaggcgcagttgtcgctcgggcttggg
gaagagaaaacgaccgaacgtctgtttttcgcggtgatggccgatgcgcccactgccgaa
catgccgcgcggattgccgacggcctgttgcgaggcgggcacgccgaaggcaagccgcta
gcgcgcgaacggctgcatgtgaccctgcatcatctgggcgattacgccggtggtctgccg
ccctcgttggtgagccgcgccagccaggccgcgacgcgcgtgcagatggacgcgttcgca
gtggagttcgatcgcgtcggcaccttcggtggcaggcgctcgcaacttccctgcgtgctg
cgtggcgaagagcaggtgcgcgggctttacgagctgcagggcgcattgggaaggcagctg
gcgcatgtcggcattgccggcgacgcgcaatacacgccgcacatgacgctgctgtactgc
aatcaggcagtgccgcagcggcgctgcgatgcgcttgcctggaccgtgcgcgacttcgcg
ctggtgcgcagctttctcggccagtcgcgttaccagatcgaaggccgctggtcgctgcgc
tga
DBGET
integrated database retrieval system
