Xanthomonas citri subsp. citri UI6: J158_01562
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Entry
J158_01562 CDS
T03894
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
xcj
Xanthomonas citri subsp. citri UI6
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDOD
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AJY85967
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All DBs
Position
complement(1634706..1636229)
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AA seq
507 aa
AA seq
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MQPDLQAALHYCRNLPSPPGVALRIIELAQDPDVDMTTTAKVIGMDMALSARMLRVANSP
LYASRRRIDNLGQALTMLGLNATLSLALGFSMVHGVRSTFIAHPLHERIWRRAGLCALAS
RILGQAYGIRKPEELMLAGLLQDIGKLALLQGAPDLYGPLLEQAADNTALLDAEREQLGA
THAEVGAWLAHQWQLPPYLQNAIAQSEEEPAGLEPFMACVALSGRLADIWLSASAVAATE
HAQQQAQDVLELDAERFEKVIERIAESLPELEALFDIRVPQPEHIQMIFEQARELAMLRS
LRELQDVAEARRHADESENRMRHLAEQASRDALTGVFNRHQLGTALTHEFELASRQGWPL
SIAFIDLDDFKRVNDAHGHLVGDEVLRNFAQTLQRMVRTSDLVARYGGEEFLVILPNTPA
DAALMVIERILAETARTPMAQLQGGPLHITFSAGLATHGGAERQFDSIDHLLQAADSTLY
RSKHRGRNRVTAYDATDVPTPPNPRAH
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccagatctccaggccgccctgcactactgccgcaacctgccctcgccgcctggc
gttgcgctgcgcatcatcgaacttgcgcaggatccggacgtggacatgaccaccacggcc
aaggtcatcggcatggacatggcattgagcgcacgcatgctgcgggtggccaattccccg
ctctacgccagtcgccgccgcatcgacaatctcggccaggcactgaccatgctcggcctc
aacgcgaccttgagcctggcactgggcttttcgatggtgcacggcgttcgcagcaccttc
atcgcccaccccttgcatgagcgcatctggcgacgcgccggcctatgcgcgctggccagt
cgcatcctcggccaggcctacggcatccgcaagcccgaagaattgatgctggccggcctg
ctgcaggacatcggcaagttggccctgctgcaaggtgcgccggatctatacgggccgctg
ctggaacaggccgccgacaacaccgcgctgctggatgccgaacgcgaacagctgggcgcc
acgcatgccgaagtcggcgcctggctggcgcatcagtggcagctgccgccgtatctgcag
aatgcgattgcgcagagcgaagaagagccggcaggcctggaaccgttcatggcctgcgtg
gcgctatccgggcgcctggccgatatctggctctcggccagtgcggtcgccgcaaccgaa
catgcgcagcagcaggcccaggacgtgctggagctggatgccgaacgcttcgaaaaagtg
atcgaacgcatcgccgaatcgctaccggaactggaagccctgttcgacatccgcgtgccg
cagcccgagcacatccagatgatcttcgagcaggcgcgtgaactggcgatgctgcgtagc
ctgcgcgaattgcaggacgtggccgaagcgcgccggcatgccgacgaatcggaaaaccgc
atgcgccacctggccgaacaggccagccgcgatgcgttgaccggggtattcaatcggcat
cagctcggtaccgcgctgacgcatgagttcgaactggcctcgcggcagggctggccgctg
tcgatcgccttcatcgacctggacgacttcaagcgcgtcaacgatgcgcacggacatctg
gtcggcgatgaagtgttgcgcaatttcgcgcaaacgctgcaacgcatggtgcgcaccagc
gacctggtggcgcgctacggcggcgaagaattcctggtgatcctgcccaatacacctgcc
gatgcggcgctgatggtgatcgaacgcatcctggccgaaaccgcgcgcacgccgatggcg
caactgcagggcggcccactgcatatcaccttctctgcgggtcttgccacgcacggcggt
gccgagcgccagttcgacagcatcgaccatctgttgcaggccgccgacagcacgctgtat
cgctccaagcatcgcggccgcaaccgcgtcaccgcttacgatgcgaccgacgtaccaacg
ccgccgaacccgcgcgcgcattga
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