Xanthomonas citri subsp. citri UI6: J158_02354
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Entry
J158_02354 CDS
T03894
Name
(GenBank) type I secretion system ABC transporter, HlyB family
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj02010
ABC transporters
xcj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J158_02354
03070 Bacterial secretion system
J158_02354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcj02000
]
J158_02354
02044 Secretion system [BR:
xcj02044
]
J158_02354
Transporters [BR:
xcj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J158_02354
Secretion system [BR:
xcj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
J158_02354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
AAA_21
AAA_30
NB-ARC
AAA_18
DUF87
PRK
Motif
Other DBs
NCBI-ProteinID:
AJY86740
LinkDB
All DBs
Position
complement(2574431..2576749)
Genome browser
AA seq
772 aa
AA seq
DB search
MACGAGKIGEIRMSEGKIVPQAQGGPGLQALQSLCLIARLHQVAADPAALAHQLGLSPSE
PVDVPDLLRAAKSLGLKARKVSCGVERLALTPLPALALLRESMREPDREPGVAGEGNDAP
RHGVRTAVLAQCDGQRVLLQEPGESASAGRPVIEPVEEFAKRWTGDLILVSSRASLAGEL
ARFDFSWFIPSLIKHRRLLGEVLLISFMLQLFALVSPLFFQVVMDKVLVHRGLTTLDVLV
GGLVVVVVFESLLNGLRGYVFSHTTSRIDVELGAKLFRHLVQLPLAYFQSRRVGDSVARM
RELENIRGFLTGNALTVVLDVLFSVVFIAVMVMYSVPLTLIVLASLPLYFGLSLAVVPVL
RRRLDQKFALGAENQAMLVETVTGIQTVKASALEPSFARRWDNQLAAYVSASFKTQNLAA
WAHEGVNLIGKLVNAATLWWGAHLVMDGQLSVGQFVAFNMFAQRVAQPIMRMAQLWTDFQ
QTGISMARLGDILNTRTEVPATSAAQLPALRGRVTLDGVHFRYRPEAVPVLCGVQLDIRP
GEVIGIVGRSGSGKSTLTKLVQRLYVPEQGRILVDGIDISLIDAAQLRRQVGVVLQENLL
FNRSVRENIAIADPAAPIEAVVHAARLAGAHDFVSELPEGYDTLVGEQGGSLSGGQRQRI
AIARALFTNPRILILDEATSALDYESEAIIQRNMAHICEGRTVLIIAHRLSAVRQAHRII
VMDKGRIVEAGPHDALIQRPQGLYAHLWRMQDGGGGTVPMTRTGPRTEEVVA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcggagcaggaaaaataggggaaatccgcatgtcggaagggaaaatcgttcct
caggcccagggcgggccggggctgcaggcactgcaatcgctttgcctgatcgccaggctg
caccaggtggcggcggacccggcggcgctggcgcaccagctgggcctgtcgccgagcgag
ccggtggacgtgccggatctgttgcgggccgcgaagagcctgggactgaaggcgcgcaaa
gtgtcgtgcggcgtggagcggctggcactgacacccttgcccgcgctggccttgctgcga
gagtccatgcgagagcccgaccgcgagccaggggttgcgggcgagggcaacgacgcccct
cgccatggcgttcgcaccgccgtgctcgcgcaatgcgatggccagcgtgtgctgctgcag
gagcccggggagagcgcgtcggccggacgtccggtgatcgagcccgtcgaagagttcgcc
aagcgctggacgggtgatctcattctcgtgagcagccgcgcgagcctggcgggcgaactg
gcccgtttcgacttctcgtggttcatcccgagcctcatcaagcatcggcgactgctgggg
gaggtcctgctcatctccttcatgctgcagctcttcgccctggtgagcccgctcttcttc
caggtcgtgatggacaaggtgctggtgcaccgaggactcaccacgctggacgtgctggtc
ggcgggctcgtggtggtggtcgtcttcgagagcctgctgaacggcctgcgcggctacgtg
ttcagccacaccaccagccgcatcgatgtggaactcggcgcgaagctgtttcggcatctc
gtgcagctgccgcttgcctacttccagtcgcgccgcgtgggcgactcggtggcgcgcatg
cgcgagctggagaacatccggggttttctcaccggtaacgcgctcaccgtggtgctggat
gtcctgttctcggtggtcttcattgcggtgatggtgatgtacagcgttccgctcacgctc
atcgtgctcgcgagccttccgctgtatttcgggctgagcctggccgtggtgccggtgctg
cggcggcgcctggaccagaagttcgcgctcggcgccgagaaccaggccatgctcgtggag
accgtcaccggcatccagaccgtcaaggcgagcgccctggagccctcgttcgcgcggcgc
tgggacaaccagctcgcggcctacgtcagcgccagcttcaaaacccagaacctggccgct
tgggcgcacgagggcgtgaacctgatcggcaaactggtgaacgcggccaccctgtggtgg
ggcgcgcacctggtcatggacggccagctcagcgtgggccagttcgtcgccttcaacatg
ttcgcgcagcgcgtggcgcagcccatcatgcgcatggcgcagctatggacggacttccag
cagacgggcatctccatggcccggctgggcgacatcctcaatacccgcaccgaggtgccc
gccaccagcgccgcgcagttgccagccctgcgcgggcgcgtcacgctcgatggcgtgcac
ttccgctaccggcccgaggccgtgccggtgctctgcggcgtgcaactggacatccgcccc
ggcgaggtcatcggcatcgtgggccgctcgggctcgggcaagagcaccctgaccaagctc
gtgcagcgcctctacgtgcccgagcagggccgcatcctggtggacggcatcgacatcagc
ctgatcgatgccgcgcagctgcggcggcaggtgggcgtcgtgctgcaggagaacctcctc
ttcaaccgcagtgtgcgcgagaacatcgccatcgccgatcctgcagcacccatcgaggcc
gtggtgcatgcggcgcggctggcgggcgcgcacgatttcgtgagcgagctgcccgagggc
tacgacacactcgtgggcgagcagggcggcagcctctcgggcggccagcgccagcgcatc
gccatcgcgcgggcgctgttcaccaacccgcgcatcctcatcctcgacgaggccaccagc
gcgctcgactacgagagcgaggccatcatccagcgcaacatggcgcacatctgcgagggc
cgcaccgtgctcatcatcgcccaccgcctctcggccgtgcgccaggcccaccgcatcatc
gtgatggacaaggggcgcatcgtggaggccggcccgcacgacgcgctcatccagcgcccg
caggggctctacgcccacctgtggcgcatgcaggacgggggcggcggcacggttccaatg
actcgcactggtccgcgcaccgaggaggtggtggcatga
DBGET
integrated database retrieval system
