Xanthomonas citri subsp. citri UI6: J158_02575
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Entry
J158_02575 CDS
T03894
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcj03016
]
J158_02575
Enzymes [BR:
xcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J158_02575
Transfer RNA biogenesis [BR:
xcj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J158_02575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Imm75
Motif
Other DBs
NCBI-ProteinID:
AJY86956
LinkDB
All DBs
Position
2802728..2803819
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AA seq
363 aa
AA seq
DB search
MPLWITHPSELTDRLQAARPSRIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGM
NAALKEWLIATDIVKVMHSASEDLVTFKCACGALPRPLFDTQIAAALAGVGGGMGYQKLV
QEVTGTLLTKGETRSDWMRRPLSPAQLEYAADDVRYLFAIHDELTRRLAEQGRLEWLAED
ADRLLATVEHDDGERWPHVSLRAAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILENE
LASQLARFPPADLEALLRQFDKFPKAPRKLANAVWDALNTPLPDEEHAPLAQAATDGNKA
VLKRLQDTVAQRSRELGLPDGLLASRRHLETLMEQRSWPAALGQWRRALLEAQLMPLLEG
TAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctttggatcacccacccctccgagctgactgaccgcctgcaggcagcgcgacca
tcgcgcatcggcctggataccgaattcattcgcgaacgcacctactggccgcaactggcc
ctggtgcagatggccatcggcgaggagatcctgctgatcgacccgctgatccccggcatg
aacgcggcgctcaaggagtggttgatcgccaccgacatcgtcaaggtgatgcatagcgcc
agcgaagacctggtcacgttcaaatgcgcgtgcggcgcattgccgcggccgttgttcgac
acccagatcgccgcggcactggccggtgtcggcggcggcatgggataccagaaactggtg
caggaagtcaccggcaccttgctgaccaagggcgaaacacgctcggactggatgcgtcgc
ccgctgtcgcctgcgcagctggaatatgccgccgatgacgtgcgctatctgtttgcgatc
cacgacgagctcacgcgccgcctcgccgagcaaggccgtctggagtggctggccgaagat
gccgaccgcctgctcgccacggtggagcacgacgatggcgagcgctggccgcatgtgagc
ctgcgcgcagcacagttcctggaaccggccgcgcaacgacggctgctgcgcttgctgcgt
tggcgcgacctgcaggcgcggcagagcgatcgcccgcgcagctggatcctggaaaacgaa
ctggccagccagctggcgcggttcccgcccgccgacctggaggccttgctgcgccagttc
gacaaattccccaaggcgccgcgcaagctcgccaacgcggtgtgggatgcactcaacacc
ccgctgccggacgaagagcacgcgccgctggcgcaggccgccaccgacggcaacaaggcc
gtactcaagcgcctgcaggacaccgtggcgcagcgtagccgcgaactcggcctgccggac
ggcctgctggcctcgcgccgccacctggaaaccttgatggaacagcgcagctggcctgcg
gcgctgggccaatggcgccgtgccctgctggaagcacagttgatgccgctgctggaaggc
acagcagcgtag
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