Xanthomonas citri subsp. citri UI6: J158_02795
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Entry
J158_02795 CDS
T03894
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J158_02795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcj03400
]
J158_02795
DNA repair and recombination proteins [BR:
xcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J158_02795
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J158_02795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
AJY87169
LinkDB
All DBs
Position
complement(3078961..3080982)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGKTYTIANVVQQVQRPT
LVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEHIE
QMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSVGEHIDQRQLIRHLTDLQ
YTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLTLFDPLTGETLRKLQR
YTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQRLAQRTQFDLEMMAEV
GFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYEVRESAGEVTELVVRPTGLID
PVVEIRPVGTQVDDLMSEVHERIKLGDRVLVTTLTKRMAENLTEYLGEHGIRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIG
RAARNLRGKAILYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVERPIADIMEGA
RDDAAEKKSGKGRSKSRHVAEETPDYRAMKPAEIAGKLKSLEQKMYQHAKDLEFEAAAQI
RDQIQKLKAASLG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttttcagctcgtatccccttattcgccagcgggcgaccagcctgcagcc
atcgacaagctggtcgccaacttcgaggctggcttggccaagcagaccttgttgggtgta
acgggctcgggcaagacctacaccattgccaatgtggtccagcaggtgcagaggccgacg
ctggtgatggcgccgaacaagacgttggcggcgcagctgtacggcgagttcaagtcgttc
ttcccgcataacgcagtcgagtacttcgtcagctactacgactactaccagccggaggct
tatgtgccatcgtctgacaccttcatcgagaaggacagttcgatcaatgaacacatcgag
cagatgcgcttgtcggcgaccaagaccctgctgtctcggcgcgattcgctggtggtggcg
accgtgtcggcgatctatggccttggcgcgccggaggactacctatcgctgcggctgatc
ctgtcggttggcgagcacatcgatcagcgccagttgatccgccatctcaccgatttgcaa
tacacccgcaacgagttcgaactgacgcgtggcgcctttcgcgtgcgcggcgaggtgttg
gatgtgttcccggccgagtcggataccgaagccttgcgcatcgagttgttcgatggcgac
atcgaacaactgacgttgttcgatccgctcactggcgaaaccttgcgcaagttgcagcgc
tacaccgtgtacccgaaaacccattacgccacgacgcgtgagcgtaccttgagtgcggtg
gacaccatcaaggaagagctgaaagagcgcctggagcaactctactcgcagaacaagctg
gtcgaggcgcaacgcctggcgcagcgcacgcaattcgatctggaaatgatggccgaggtt
gggttttgcaacggtatcgaaaactactcgcggcatctcaccggcaaggcgccgggagag
ccgccgccgaccttgttcgactacctgccgcccgacgcactgctggtcatcgacgagtcg
catgtgacgatcccgcagatcggtgcgatgtacaagggcgaccgttcgcgcaaggaaacg
ctggtggagttcggttttcggctgccctccgcactggacaaccgtcccttgcgtttcgaa
gagtgggaggcgcgttcgccacgcagcatctacgtttcggcaacgcccggtccttacgag
gtgcgcgagtcggctggcgaagtcacggagctggtggtgcgcccgaccgggttgatcgac
ccggtcgtggagatccgcccggtcggcacacaggtcgacgacctgatgtccgaagtccac
gagcgcatcaagcttggcgatcgcgtattggtgaccacgttgaccaagcgcatggccgaa
aacctcaccgagtacctgggcgaacacgggattcgggtgcgctacctgcattcggatatc
gacaccgtcgagcgcgtggaaatcattcgcgatctgcgtctgggcaagttcgatgtactc
gtgggcatcaatctgctgcgcgagggtttggacatgccggaagtctcgctggtggcgatc
ctggatgccgacaaggaaggcttcctgcggtcgaccggttcgctgatccagaccattggc
cgtgccgcacgcaatctgcgcggcaaggccatcctgtatgccgacaagatgacgcgttcg
atgcaggcggcgatcgacgagaccgatcgtcgccgtgagaagcaggtcgagtacaacctg
gaacatggcatcactccgaaatccgtcgagcggccgatcgccgacatcatggaaggcgcg
cgcgacgatgcggccgagaagaagtcgggcaagggccgttcgaaatcacgccatgtagcc
gaggagacgcccgattaccgtgccatgaagcctgcggaaatcgctggcaagctcaagagc
ctggagcagaagatgtatcagcacgcaaaggatctggagttcgaggccgcagcccagatt
cgcgaccagatccagaagttgaaagcggcaagtctgggctag
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integrated database retrieval system
