Xanthomonas citri subsp. citri UI6: J158_02991
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Entry
J158_02991 CDS
T03894
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J158_02991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcj03000
]
J158_02991
03400 DNA repair and recombination proteins [BR:
xcj03400
]
J158_02991
Enzymes [BR:
xcj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J158_02991
Transcription factors [BR:
xcj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
J158_02991
DNA repair and recombination proteins [BR:
xcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J158_02991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AJY87362
LinkDB
All DBs
Position
3294796..3296259
Genome browser
AA seq
487 aa
AA seq
DB search
MQTATPDRTQCDRARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPNPSNISYYPTAAAA
SAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIADGALQEQPVQTLADAVGLSARQLQ
RQFVQQLGATPIQVHGTHRLLLAKQLLTETALPVTEVALAAGFNSLRRFNAAFLQGCGMP
PSALRKQRAEVPGGELTLRLGYRPPLDLPAMLAFLQRRAIPGIEQVDANGYRRVIGAPGN
ASVIEVSAAPQRAELLLRIGATDPRQIPQIVRRVRRLFDLDADLQAVHATLAPEPLLAEA
IARRPGLRVPGGWDGFEVAVRAVLGQQISVAGAATLAARLVDRHGGHHADMPPGLDRSFP
MPEQLADAPLEQLGLPRARAATLRALASACAQGQLHFGAGQRLPDFIAACTALPGIGPWT
AHYVAMRALSHPDAFPAGDLILQQVLGAPGRLSERATDARSQAWRPWRAYAVLHLWHLAN
DRKDTRA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgcaacgcccgaccgaacccaatgcgaccgcgcccgcctggcacgcgatgcg
cgcttcgacgggctgtttttcaccgccgtgcgcagcaccggcatctattgccgcccggtg
tgtccggcgccgccgccgaatccgtccaatatcagttactaccccactgccgcggcggcc
agcgccgccggctaccggccatgcctgcgctgccggccggagctgtcgccgcaggcgcag
cagcatctgggcgaagaaagcgtgcagcgtgcgctggcgatgattgccgacggcgcgctg
caggagcagccggtgcagacgctggccgacgcggtgggcttgagcgcgcgccaactgcag
cggcaattcgtgcagcagctgggcgccacgccgatccaggtgcacggcacgcatcggctg
ctgctggccaagcaattgctgaccgaaaccgccctgccggtcaccgaggtcgcgctcgcg
gccggcttcaacagcctgcgccgcttcaatgcggccttcctgcagggctgcggcatgccg
ccttctgcactgcgcaagcagcgtgccgaggtgccgggcggcgaactgacattgcgcctg
ggctatcgcccgccgctggacctgccggcgatgctggccttcttgcagcgccgcgcgatc
ccgggcatcgagcaggtcgatgcgaacggctaccggcgcgtgatcggcgcgccgggcaac
gccagcgtgatcgaggtcagcgcggcaccgcagcgcgcggagctgctgctgcgcatcggc
gccaccgacccgcgccagattccgcagatcgtgcgacgcgtgcgccggctgttcgatctg
gatgcagacctgcaggccgtgcacgccacgctcgcgccggaaccgctgctggccgaggca
atcgcgcgccgacccggcctacgcgtgcccggtggctgggacggcttcgaagtggcggtg
cgtgcggtcctggggcaacagatcagcgtggccggcgcggccacgctggcagcgcggctg
gtcgaccgccacggcggccatcatgccgacatgccccccggactggatcgcagtttcccc
atgcccgaacagctggccgacgcgccgctggaacagctcgggctgccgcgtgcgcgcgcc
gccacgctgcgtgcgctggcctcggcctgcgcgcaaggccagctgcacttcggcgccgga
cagcgcctgcctgatttcatcgccgcctgcaccgcgctgcccggaatcggaccgtggacc
gcgcattacgtggccatgcgcgcgttgtcgcatccggacgcgtttccggccggcgacctg
atcctgcagcaagtgctcggcgcccccgggcgcctgagcgaacgcgccaccgatgcccgt
tcgcaagcgtggcgaccgtggcgcgcctacgccgtgctgcacctgtggcatctggccaac
gaccgcaaggacacccgcgcatga
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