Xanthomonas citri subsp. citri UI6: J158_03307
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Entry
J158_03307 CDS
T03894
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J158_03307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcj03400
]
J158_03307
Enzymes [BR:
xcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J158_03307
DNA repair and recombination proteins [BR:
xcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J158_03307
RecFOR pathway proteins
J158_03307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_16
AAA_22
TIP49
nSTAND3
AAA_14
Bac_DnaA
TsaE
AAA_33
AAA_2
NTPase_1
NB-ARC
Rad17
RNA_helicase
DUF815
AAA_18
TniB
AAA_17
AAA_28
Sigma54_activ_2
AAA_24
ABC_tran
ATPase_2
NPHP3_N
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AJY87676
LinkDB
All DBs
Position
complement(3672448..3673488)
Genome browser
AA seq
346 aa
AA seq
DB search
MTEQRIIASSSTREDDAADASIRPKRLADYLGQQPVREQMEIYIQAAKARGEAMDHVLIF
GPPGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPV
VEEVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRL
EFYSPQELTRIVIRSAAILGIDCTAEGAAEIARRARGTPRIANRLLRRVRDYAQVKAAGH
IDLPVAQAAMQMLKVDPEGFDELDRRMLRTIVEHFDGGPVGVESLAASLSEERGTLEDVI
EPYLIQQGFLIRTARGRMVTPKAYLHLGLKPPRERAPGIGEPGDLF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcagcgcatcatcgccagcagctccacccgcgaagacgatgccgccgatgcg
agcattcgtcccaagcgcctggccgattatctcggccagcaaccggtgcgcgagcagatg
gagatctacatccaggcggccaaggcgcgtggcgaggcgatggatcatgtgctgatcttc
ggcccgccggggctcggcaagaccacgctcagtcacgtcattgccaacgagctgggcgtg
agcctgcgcgtgacctccggcccggtgatcgaaaaggccggcgatctcgcggcgttgttg
accaacctgcagccgcacgatgtgttgttcatcgacgaaatccatcgcctctcgccggtg
gtggaggaagtgctgtatccggcaatggaagatttccagatcgacatcatgatcggcgac
ggcccggccgcgcgttcgatcaagatcgacctgccgccgttcaccctgatcggtgccacc
acgcgtgccggattgctgaccgcaccgctgcgcgaccgcttcggcatcgtgcagcggctg
gagttctattccccgcaggaactgacccgcatcgtgatccgctcggcggcgattctcggc
atcgactgcacggccgaaggtgcggcggaaatcgcacgccgtgcgcgcggcaccccgcgt
atcgccaaccgcttgctgcgtcgcgtgcgcgactacgcccaggtcaaggcggccgggcat
atcgatctgccggtggcgcaggcggccatgcagatgctcaaggtcgacccggaaggcttt
gacgagctcgaccgccgcatgttgcgcaccatcgtcgaacacttcgacggcggcccggtc
ggcgtggaatcgctggccgcctcgctgtcggaggagcgcggcacgctggaagatgtgatc
gagccgtacctgatccagcagggctttctgatccgcaccgcgcgcggccgcatggtcacg
cccaaggcctatctgcacctgggcctgaaaccgccgcgcgagcgcgccccgggcattggc
gaaccgggagacctgttttga
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