Xanthomonas citri subsp. citri UI6: J158_03413
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Entry
J158_03413 CDS
T03894
Name
(GenBank) RHS repeat-associated core domain
Organism
xcj
Xanthomonas citri subsp. citri UI6
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Avidin
Motif
Other DBs
NCBI-ProteinID:
AJY87781
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All DBs
Position
3799056..3803579
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AA seq
1507 aa
AA seq
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MQDVQKRAPGYGSKWFGMLLAIVVTCVSLVPTIQIAHAYDSGVCNAGTRLCDQGQAYLNA
IKEGNEAICIGGGINTHASLVLDLAYDQRYQAVVQCYRAFDNFTSESGLGESFYPLKCSA
RPTFTPAAGSTGNLCQEGCEYTVSNNGGQPVATPNGAVCSPPPPLDPGKNNGCCDGSTGP
TTAGNPANVFTGTKLETAADYRAPAGHLEFVRYYSSAVGLQPTSALGNTWRHSYIRTITV
TDASTLILTRPNGNFYTFKKSANGTWTPDWDVRETLSEVQDNGTLTGWQVTATDDSKEQF
DLDGKLTGISYTDGEQLTLTYAGRQLQSVTDTRGRRLLFAYQADRITQVGLPDGMVLAYG
YDSQARLRSVTLQTAAGAVASAIAGYDYGNARFPDALTTHRDEQDQVYASWTYDAQQRVV
RSVHGDPTGKIDEATIAYSGNTSTVSNALGNAVTRTGISKLGQAKVTAVQGLCPECTVGA
FKSRSYDGNGYPDQEVDFAGVATDWRYNNRGLLASKIEADNSSGGQKRTLQTDWHPSFRV
PTDQRTYDASDILVARTSWTYNSRGQALTVSRTDPSGGPTRVTTQRYCEDSDTAAGNCSL
PGLLLASDGARTDIADSTSYTYYLADDASCTASASTCPHRKGDRWKVTNALGQTTEYLAY
DGAGRPLSIKDTNGIVTDYTYHPRGWLTASKVRGADASSEADDRITRIDYWPTGLVRQVT
QPDGAFTAFTYDAAHRLTDITDNAGNTVHYTLDNAGNRVKEDTKDAAATLKRTLSRVYNQ
LGQLKTQATAASDPTDFAYDANGNATKVTDALATATQSEYDPLNRLSHTLQDVAGIKADT
KFAYDALDNLTKVTDPKGLDTTYDYNGFGELVKLTSPDTGVTSYTYDSAGNRATQTDARG
NTTAYSYDALNRLTKVTYPTSSLDVTYTYDVTQTACTSGETFSIGRLTKMQDGGAITQYC
YNRFGDLVRKVQTSNGTALVLRYDYTVGGQLRRMTYPDGAVVDYVRNAQGQTTQVGVTPA
GGSRQVLLGNATYYPFGPAAGWTYGNGRTLARQYDLDYRPQAIQDTRPGGLDVGFGFDPA
GNLTALTPAGNTTPEIGLGYDALGRLTGLTDGVTGTVIDGYSYDATGNRLSTKVGTATQI
YTYPNDSHRLSAVAGVARIYDATGNTTAIGGTARQYTYDTSGRMTQARRAGAVTMNYRYN
GKGEQVRRFLGTTNTYTLFDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLLANANKLHYIE
PDHLGSPRVVIDPTRDVAVWTWSLKGEAFGNTAPNQDPDGDGAAAVLDMRFPGQRFDAAS
GLNQNYFRDYEAATGRYGQSDPIGIEGGISTYSYSLSSPVKYIDVLGLAVYLCSRPVNVG
WVPDWARPYLRHMWVKTSSFEAGMGGECPIPGQGCADVPYSATVTKDHSGQSNQAGSSCE
LQQNVDEQCVNEKIKPGQPTGTWSVLNQCQSFSNGVVNQCRYGPQIGPILPNTFRTRGPL
GSQFSPE
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgtgcagaagcgagccccgggatacgggagcaagtggttcgggatgttgttg
gccattgtggtgacgtgcgtttccctcgttcctacgatacagatcgcccacgcctatgac
tcgggcgtctgcaatgcagggacgcgcttgtgcgatcaaggccaggcttatctcaatgcc
atcaaggaaggaaacgaagcaatctgcattggcggcgggataaatacacacgccagcttg
gtactcgacctagcctatgatcagcgctaccaagcggtagttcagtgctacagagcgttt
gataactttaccagcgaatctggtttaggcgaaagcttttatcccctaaagtgcagcgcc
agaccgacattcacccctgctgctggcagtactggcaacctatgccaggaaggctgcgaa
tatacggtcagcaacaacggcggccagccggtcgcaacgccaaacggggcggtctgctcg
ccaccgccaccgctcgatcccggcaagaacaatggctgttgcgatgggagcactggtccg
accaccgccggcaatccggccaatgtgttcaccggaaccaagctcgaaacggcggccgac
taccgtgcgccagcagggcatctggaattcgtccggtattacagcagtgccgtcggcctg
cagcccaccagcgcgctcggcaacacctggcgccatagctacatccggaccatcaccgtc
accgatgcatcgacactgatcctgacgcgccccaacggtaacttctacacgttcaagaag
tccgccaatggcacatggacaccggactgggatgtgcgcgaaacgctgtccgaagtgcaa
gacaacgggacgctgactggatggcaggtgactgccaccgacgacagcaaagagcagttc
gatctggacggcaagctgaccggcatcagctacaccgatggcgagcagctcaccctgact
tacgccggccgccagttgcaatcggtgacggatacgcgtggccgtcgcctgctatttgcc
taccaggcagacaggatcacacaagtcggactccccgatggaatggtgctggcctacggc
tacgactcccaggcgcgattgaggtcggtgaccttgcagacagctgccggagcggtggcg
tcggctatcgccgggtatgactatggcaatgcgcgcttcccggatgcactgaccacccac
cgcgatgagcaggaccaggtgtatgcctcgtggacctacgatgcgcagcaacgcgtcgta
cgcagcgtgcatggcgatccgaccggcaagatcgacgaggccactattgcctactctggg
aacacttccacagtctccaatgcgctcggcaatgcagtaacgcgcactggcatctccaag
cttggccaggccaaggttaccgccgtccagggcttgtgccccgaatgcacggttggggcg
ttcaaatcgcgcagctacgacggcaacggctaccccgaccaggaagtcgattttgcaggc
gtcgccactgattggaggtacaacaaccgtggcttgttggccagcaagatcgaagcggac
aacagcagcggcggccagaagcgcacgctgcagacggactggcaccccagtttccgtgtg
cccaccgaccagcgcacctacgatgccagtgatattctggtcgcaaggacgagctggacc
tacaacagcaggggtcaggcactgaccgtatcgcggacggatccaagcggaggtcctacc
cgcgtcaccacccagcgctactgcgaagacagcgatactgctgccggcaattgttccttg
cccggcttgctgttggccagcgatggcgcacgcacggatatcgcggatagcaccagctac
acctactaccttgccgacgacgccagttgcacggcatcggcgagtacgtgcccgcatcgc
aaaggcgaccgatggaaagtcaccaacgccctcggccaaaccaccgaatacctcgcctac
gacggcgcaggccgtccgctgtccatcaaggacaccaatggcatcgtcaccgactacacc
tatcacccgcgcggttggctgaccgccagcaaggtgcgcggggccgatgcgtccagcgag
gccgatgaccgcatcacccgcatcgactactggcccaccggcctggtcaggcaggtcacc
cagcccgatggcgcgttcactgccttcacctacgatgcggcgcatcggctgaccgatatc
accgacaacgcgggcaataccgtccactacacgctggacaacgccggcaatcgcgtcaag
gaagacaccaaggacgcggccgccacgttgaagcgcacgctctcgcgcgtgtacaaccag
ctcggccagctcaagacccaggccaccgccgccagcgacccgaccgacttcgcgtacgac
gccaacggcaacgccaccaaagtgaccgatgcgctggcaaccgcgacgcagagcgagtac
gacccgctcaatcgcctctcgcacacgttgcaggatgtcgccggcatcaaggccgacacg
aagttcgcctacgacgcactcgacaacctgaccaaggtcaccgaccccaaggggctggac
accacctacgactacaacggcttcggcgagttggtgaagctcaccagcccggacaccggc
gtcaccagctacacctacgacagcgccggcaaccgcgccacccagaccgatgcgcgcggc
aacaccaccgcctacagctatgacgcgctcaatcgcctgaccaaggtcacctaccccacc
tccagcctcgacgtcacctacacctacgacgtgacgcagaccgcttgcaccagcggcgaa
acgttttcgatcggtcgcctgaccaagatgcaggacggcggcgccatcacccagtattgc
tacaaccgcttcggcgatctggtgcgcaaggtacagaccagcaacggcaccgcgttggtg
ctgcgttatgactacaccgtcggcggccagttgcgccgcatgacctatccggatggcgca
gtcgtcgattacgtgcgcaatgcacaaggccagaccacgcaggtcggcgtgacgcccgcc
ggcggtagccggcaggtgctgctgggcaatgccacttactacccgttcggcccggctgcc
ggctggacctacggcaatggccgcaccctcgcccgccagtacgatctggactaccgcccg
caggccatccaggacacccgcccgggcgggctggacgtcggcttcggcttcgacccggcc
ggcaacctcaccgcattgacgcccgcaggcaacaccacaccggagatcggcctgggctac
gacgcgctgggccgcctgaccggcctcaccgatggtgtcaccggaactgtcattgacggc
tacagctatgacgccaccggcaaccgcctcagcaccaaggtcggcacggccacgcagatc
tacacctacccgaacgacagccaccgcctcagcgccgtcgccggcgtcgcacgtatatac
gatgccaccggcaacaccaccgccatcggcggcaccgcccgccaatacacctatgacacc
agcggccgcatgacccaggcccgccgcgccggcgcggtgaccatgaattatcgctacaac
ggtaaaggcgaacaggtgcgccgcttcctcggcaccaccaacacctacacgctctttgat
gaagccggccactggctgggcgactacgacagcaacggcgcgcccaaacaacaggcgatc
tggctggacgatctaccggtcggcctgctggcgaatgccaacaaactgcactacatcgaa
cccgaccacctgggcagcccgcgcgtggtgatcgatccaacccgcgatgtggcggtgtgg
acgtggagcctgaagggcgaagccttcggcaacaccgcgccgaatcaggatccggatggg
gatggtgcggcggcggtgttggatatgcgcttcccggggcagcggtttgatgcggcgagt
gggttgaatcaaaattatttccgggattatgaggcggctacagggcggtatgggcagagt
gatccgattggaattgaaggtgggatcagcacatattcatacagtctaagctcgcctgtt
aaatatatcgatgttcttgggctggctgtctacctatgctcaaggccagtcaatgtcggc
tgggttccggattgggcgcgaccgtaccttcgccatatgtgggttaaaacatcctcgttt
gaggctggaatgggaggtgaatgtcccattcctggacagggttgtgcagacgttccttac
tcggcaacagtgaccaaggatcactcgggccagtcgaaccaagcaggttctagctgtgag
cttcagcaaaatgtggacgagcagtgcgtgaacgaaaaaataaaaccagggcaaccgaca
ggcacttggagcgtgttgaatcaatgccaaagcttctcaaacggcgttgtcaatcaatgt
cgctacggccctcaaattggcccaatcttgccaaacacatttaggactcgcggccctctt
ggctcacaattttccccggagtag
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integrated database retrieval system
