Xanthomonas citri subsp. citri UI6: J158_03479
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Entry
J158_03479 CDS
T03894
Name
(GenBank) rRNA methylase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcj03009
]
J158_03479
03016 Transfer RNA biogenesis [BR:
xcj03016
]
J158_03479
Ribosome biogenesis [BR:
xcj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J158_03479
Transfer RNA biogenesis [BR:
xcj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
J158_03479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Plasmod_MYXSPDY
Motif
Other DBs
NCBI-ProteinID:
AJY87846
LinkDB
All DBs
Position
complement(3877558..3878475)
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AA seq
305 aa
AA seq
DB search
MTQHDGRGGRPPRDGGSGPSHNPWGRAAPRTPAPRSAAPRAPAQHAPAATPSAAAASGNA
REVRLYGINAVQAVFKTRPEALRKLYLSEARIPQFKALLAWCVTQRIGYRVVEEADLSKL
AASAHHEGVVAEVLRVTPHPLQEWLAALPQGPVLALWLDGVGNPHNFGAILRSSAHFGVA
GLLLPAGSTLGLSGAAARVAEGGAEAVPLVQLPDTATALAQLRQAGFAIAATLVDGGQDV
FAAALPQRLVYVMGAESDGMDRAFARDCDLQLSIRGSGKVESLNVASATAVFQAAWHARM
LTGEH
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcatgatggacgcggcggacggccgccacgcgatggcggctccggcccctcg
cacaatccgtggggccgcgctgcgccgcgcacaccggcgccgcgcagcgccgcaccccgt
gctccagcgcagcacgctccagccgccacgccatctgccgctgcagcgagcggcaacgcg
cgtgaggtgcggctgtacggcatcaatgccgtccaggccgtgttcaagacgcgcccggag
gcgctgcgcaagctgtacctgagcgaggcgcgcattccgcaattcaaggcgctgctggcc
tggtgcgtgacccagcgcatcggttatcgcgtggtggaagaggccgatctgagcaagctc
gctgccagtgcgcaccatgagggagtggtggccgaggtgctgcgcgtcaccccgcacccc
ttgcaggaatggctggccgcgttgccgcagggcccggtgctggcgctatggctggacggg
gtgggcaacccgcataacttcggggcgatcttgcgctcgtcggcgcacttcggcgtggcc
ggtctgttgctgccggccggctccacgctgggcctgtcgggcgcggccgcacgcgtggcc
gaaggcggcgccgaagcggtaccgctggtgcaattgcccgacaccgcaacggcgttggcg
cagctgcgtcaggccggttttgcgattgctgccacactggtcgacggtggccaggatgtc
ttcgccgccgcgttgccgcaacgcctggtatacgtgatgggcgcagaaagcgacggtatg
gaccgcgcatttgcgcgcgattgcgatctgcagttgtcgatccgcggcagcggcaaggtg
gaaagtctcaacgttgcctcggccaccgcggtcttccaggccgcctggcacgcgcgcatg
ctcaccggagaacactga
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