Xanthomonas citri subsp. citri UI6: J158_03723
Help
Entry
J158_03723 CDS
T03894
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj00040
Pentose and glucuronate interconversions
xcj01100
Metabolic pathways
xcj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J158_03723
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J158_03723
Enzymes [BR:
xcj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J158_03723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJY88088
LinkDB
All DBs
Position
complement(4201726..4202859)
Genome browser
AA seq
377 aa
AA seq
DB search
MKPKFSTAAAASLFVGSLLLTGVAYADAALEVATTGWATQNGGTKGGSKAAAANIYVVKN
AAELKAALSASVGSNGRIIKVSGIIDISEGKPYTKTSDMKTRARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNITIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGASNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDIKKGANFVTVSYSAFKSHEKNNLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNAVYPFSYAHGVGKESK
IFSERNVFEISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNTNIGWTPPYTYNLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcgacggcggccgccgcgtcgctgttcgttgggtcgttgctgctc
accggcgttgcctatgccgatgcggcgttggaggttgcaaccacgggttgggcgacccag
aacggcggcaccaagggcggctccaaagcagctgccgccaatatctacgtcgtcaagaac
gccgccgagttgaaagcagcattgagcgcaagcgtcgggagcaacgggcgcatcatcaag
gtcagcggcatcatcgatatcagcgaaggaaagccttacaccaaaacctcggacatgaag
acgcgcgcgcgtctggacgtgcccaccaagaccacgctgatcggcatcaccagcaacgct
gaaattcgcgaaggctatttttacgtcaaggccaacgacgtcatcatccgcaatatcacc
atcgaaaatccatgggacccggagccggtctgggacccggatgatggcagcgccggcaac
tggaatgcggagtacgacggcctgaccgtggaaggcgccagcaacgtgtgggtggaccat
gtcaccttcaccgatggccgccgtaccgacgatcagaatggcactgcaaatggtcgtccg
aaacagcaccacgatggcgcgatggacatcaagaaaggcgccaatttcgtcaccgtctcg
tactcggccttcaagtcgcacgaaaagaacaacctgatcggctccagcgacagcgcgtcc
agtaccgacagcggcaagctcaaggtcaccattcacaacaccctgttcgaaaacatttct
gcgcgcgccccgcgcgtgcgcttcggtcaggtgcacctgtacaacaactaccacgtcggc
agcaccagcaatgcggtgtatccgttctcctacgcgcatggcgtgggcaaggagtcgaag
atcttctccgagcgcaacgtgttcgagatcagcggtgtcagcagctgcgacaagatcgcc
gccgactacggtggcagcgtgtatcgcgatcagggttcgctgctcaacggcaaggcgctg
tcgtgctcgtggaataccaacatcggctggacaccgccctatacctacaatctgctatcg
gcagacaaggtcgctgcagacgtcaaggcgaaagcaggcgccggcaagctgtaa
DBGET
integrated database retrieval system
