Xanthomonas citri subsp. citri UI6: J158_03989
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Entry
J158_03989 CDS
T03894
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent, monomeric type
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj00020
Citrate cycle (TCA cycle)
xcj00480
Glutathione metabolism
xcj00720
Other carbon fixation pathways
xcj01100
Metabolic pathways
xcj01110
Biosynthesis of secondary metabolites
xcj01120
Microbial metabolism in diverse environments
xcj01200
Carbon metabolism
xcj01210
2-Oxocarboxylic acid metabolism
xcj01230
Biosynthesis of amino acids
xcj04146
Peroxisome
Module
xcj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcj_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J158_03989
09102 Energy metabolism
00720 Other carbon fixation pathways
J158_03989
09106 Metabolism of other amino acids
00480 Glutathione metabolism
J158_03989
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
J158_03989
Enzymes [BR:
xcj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
J158_03989
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Gene cluster
GFIT
Motif
Pfam:
IDH
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
AJY88353
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Position
complement(4485889..4488120)
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AA seq
743 aa
AA seq
DB search
MSKTPKILYTLTDEAPYLATQSLLPIIDAYTDTAGIVVETRDISLAGRILALFPEHLSDT
QKIADDLAELGELATTPEANIIKLPNISASVPQLKAAIKELQGQGYALPAYPDEPKDAAE
KDIKARYDRVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGKWSSDSKSHVSHMESG
DFFGSEQSATIADAGTLKIEFVGADGSSTVLKDKVAVKAGEIVDAAVLSKRALASFIDAQ
IADAKARDVLFSVHLKATMMKVSDPVLFGVVVGEFYKDTLSKHADALKSVGFDPNNGIGD
LYARIGTLPEEQQAQITADIQAEYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRD
SGQMWNAQGKLQDTKAVIPDRCYADVYQAVIDDCKAHGAFDPSTMGSVPNVGLMAQKAEE
YGSHDKTFQMSGAGTVKVTDGNGKTVFEHAVEAGDLWRMCQVKDAPIQDWVKLAVERARL
SETPAVFWLDKARAHDAQVIAKVEQYLKDHDTNGLDIRILPPVEATTFSLERIRKGQDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLFETGAGGSAPKHVQQFVEENCL
RWDSLGEFLALAASLEHLGNRYDNPSATVLAKALDVANGQFLDNNKSPARKVGELDNRGS
HFYLAMYWAQALAAQTEDMALQAKFAPLAKALTGNEATIVAELNGAQGKPVEIGGYYHPD
LAKVSESMRPSKTFNDILATLKA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagacaccgaagatcctctacacgctcaccgacgaagcaccctacctggccacg
cagtcgctgctaccgatcatcgatgcctacaccgataccgccggcatcgtggtcgaaacg
cgcgatatctcgctggccgggcgcattcttgcgctgtttcccgagcatttgagcgacacg
cagaagatcgccgacgacctggccgaactgggcgagctggccaccacgccggaggccaac
atcatcaagctgcccaatatcagcgcctcggtgccgcagctcaaggccgcgatcaaggag
ctgcaaggccagggctacgcgttgccggcgtatccggacgagcccaaggatgctgcggaa
aaagacatcaaggcgcgctacgacagggtcaagggcagcgcggtgaatccggtgctgcgc
gagggcaattccgatcgtcgtgcaccgctgtcggtgaagaattacgcacgcaagcacccg
catcgcatgggcaagtggagcagcgattccaagtcgcacgtgtcgcacatggagtccggc
gatttcttcggtagcgagcagtccgccaccatcgccgacgccggcacgttgaagatcgaa
ttcgtcggtgccgatggcagcagcaccgtgctgaaagacaaggtcgcggtcaaagccggc
gaaatcgtcgatgctgccgtattgagcaagcgcgcgctggccagcttcatcgacgcgcag
atcgccgatgccaaggcccgcgacgtgctgttctcggtgcatctgaaagccaccatgatg
aaggtctccgatccggtgctgttcggcgtggtggtcggcgagttctacaaggacacgctg
agcaagcatgccgatgcgctcaagtcggtcggtttcgatcccaacaacggcatcggcgat
ctgtacgcacgcatcggcacgttgccggaagagcagcaggcacagatcaccgccgatatc
caggccgaatacgcgcagcgtccgggcctggcgatggtcaattcggacaagggcatcacc
aacctgcatgtgcccagcgacgtgatcgtcgatgcttccatgccggcgatgattcgcgac
tccggccagatgtggaacgcgcaaggcaagttgcaggacaccaaggcggtgattccggat
cgttgctacgcggacgtatatcaggcggtaatcgacgactgcaaggcgcacggcgcgttc
gatccgtccacgatgggctcggtgcccaacgtggggctgatggcgcagaaggccgaagaa
tatggctcgcacgacaagaccttccagatgtccggcgccggcaccgtcaaggtcaccgat
ggcaacggcaagacggtgttcgagcacgcagtggaagccggcgatctgtggcgcatgtgc
caggtcaaggacgcgccgatccaggattgggtgaagctggccgtggagcgcgcccgcctg
agcgagacgccggccgtgttctggctggacaaggcgcgcgcacacgatgcgcaggtgatc
gccaaggtcgagcagtatctcaaggatcacgacaccaacggcctggatatccgcatcctg
ccgccggtggaagcgacgaccttctcgctggagcgcatccgcaagggtcaggacaccatc
tcggtcaccggcaacgtgctgcgcgactacctcaccgacctgttcccgatcatggagctc
ggtaccagtgccaagatgctgtccatcgtgccgctgatggccggcggcggcctgttcgaa
accggtgccggtggttcggcgcccaaacatgtgcagcagttcgtcgaagagaactgcctg
cgctgggattcgctgggggaattcctggccctggccgcgtcgctcgagcacctgggcaac
cgttacgacaacccatcggccaccgtgctggccaaggcgctggatgtcgccaacggccag
ttcctggacaacaacaagtcgccggcgcgcaaggtcggcgagctcgataaccgcggcagc
cacttctatctggcgatgtactgggcgcaggccctggctgcgcagaccgaagacatggct
ttgcaggccaagttcgcgccgctggccaaggccctgaccgggaacgaagccacgatcgtg
gccgagctcaacggcgcgcagggcaagccggtggagattggcggttactaccatcccgac
ttggccaaggtcagcgagtcgatgcgccccagcaagaccttcaacgacatcctggccacg
ctcaaggcctga
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