Xanthomonas citri subsp. citri UI6: J158_04282
Help
Entry
J158_04282 CDS
T03894
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xcj
Xanthomonas citri subsp. citri UI6
Pathway
xcj03420
Nucleotide excision repair
xcj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J158_04282
03430 Mismatch repair
J158_04282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcj03400
]
J158_04282
Enzymes [BR:
xcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J158_04282
DNA repair and recombination proteins [BR:
xcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J158_04282
MMR (mismatch excision repair)
Other MMR factors
J158_04282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AJY88637
LinkDB
All DBs
Position
complement(4826761..4828932)
Genome browser
AA seq
723 aa
AA seq
DB search
MLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK
AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR
VVQALELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS
GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGNVF
VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI
GKQLWTDSGNGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE
EALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIGDRTLD
EVRRLARASALSLWEAAMLCTQQNTLAARARNALATFLSLIGQLHAETGEMELAERIDHV
LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL
EAGAGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY
VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRTASLGAAR
GGPVHGIVETAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAYANL
TVV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgatcatttaaaccccgcccagcgcgaggccgtttctgcgccgccggggcactac
ctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatccatcgcatcgcctgg
ctcaatgaagtccagggcgtgcccaaccacggcatcttcgcggtgaccttcaccaacaag
gccgccggcgaaatgcgtcaccgtaccgacctgcagctgcgcaatggcagccgcgggatg
tggatcggtacatttcacgggctggcacatcgcctgttgcgtctgcattggcaggatgcg
cggctgccggaaggcttccaggtcatggacagcgacgaccagttgcggctcgtcaagcgc
gtggtgcaggcgctggagctggacgagagcaagtatcctcccaagcagatgagctggtgg
atcaacgagcagaaggatgagggccgccgtccgcagcatatccagcccgagcccaacgac
gattggaccgaggtgcgccggcaggtgtatgcggcctaccaggaacgctgcgaccgctcc
gggctgctggatttcgccgagttgctgctgcgcgcgcatgagttgctgcgcgacacgccg
gcattgctggcgcattaccgcgcgcgcttccgcgagattctggtggacgagttccaggac
accaacgccatccagtacgccttcgtgcgcgtgctggccggcgagtcgggcaatgtgttc
gtggtcggcgacgacgaccaggccatctatggctggcgcggcgccaaggtcgaaaacgtc
cagcgctttctgaaggatttccccggtgcgcagaccgtgcggctggagcagaactaccgt
tccagcgcgaatattctgggcgctgccaatgcggtgattgcgcacaacccggaccgtatc
ggcaaacagctgtggaccgattcaggcaatggcgacccgatcgatctgtacgcggcctac
aacgaagtggacgaagcgcgctatgtggtcgagcgtgcacggcagtgggtgcgcgacggc
ggcagttatggcgaagtggcggtgctctaccgcagcaacgcgcaatcgcgcgcgctggaa
gaagcgctgatttccgagcagttgccgtaccgcgtgtatggcggcatgcgtttcttcgaa
cgtgccgaaatcaaggacgcgttggcttacttgcgtctgctgaccaatcgcagcgacgac
gctgcgttcgaacgcgcggtcaacacgcccacgcgcggcattggcgatcggacgctggat
gaggtgcgccggctggcacgtgccagtgcgctgtcgttgtgggaagcggcgatgctgtgc
acgcagcagaacacgctggccgcgcgcgcacgcaatgccctggccaccttcctcagcctg
atcggccagctgcatgccgaaaccggcgagatggaactggccgaacgcatcgaccatgtg
ctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgcggcgggctggattcg
gaatcgcgtaccgagaacctggacgaactggtgtcggtcgcctcgcgcttcacccgcccg
gacgatgaagacagccagggcatgaccgagctggtcgccttcctggcttacgcctcgctg
gaggccggcgcaggccaggcgcaggctggcgaagaaggcgtgcagctgatgacgctgcat
tcggccaagggcctggaatttccgattgtgttcctggtcggcctggaagacggcctgttt
ccgagtgcgcgctcgctggaagagagcgggcggctggaagaagagcgtcgcctggcgtac
gtgggcatcacccgcgcgcggcagaagctggtgctgtgctacgccgaatcgcgccgtatc
cacggccaggacaattacaacgtgccctcgcgcttcctgcgtgagattccgcgcgacctg
ctcaacgaagtgcgcccgaaggtgcaggtttcgcgcaccgcatcgctgggcgcggcgcgc
ggcggcccggtgcatggcatcgtggaaacggcaccgatcaagctcggcgccaacgtcgaa
caccccaagttcggcggcggcgtggtcgtcgattacgaaggcgctggcgcgcatgcgcgc
gtgcaggtgcagttcgacgaggtcggcgccaagtggctggtgatggcctacgccaatctg
actgttgtctag
DBGET
integrated database retrieval system
