Candidatus Xianfuyuplasma coldseepsis: G4Z02_02410
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Entry
G4Z02_02410 CDS
T08386
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xcl
Candidatus Xianfuyuplasma coldseepsis
Pathway
xcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G4Z02_02410 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcl03400
]
G4Z02_02410 (xth)
Enzymes [BR:
xcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
G4Z02_02410 (xth)
DNA repair and recombination proteins [BR:
xcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
G4Z02_02410 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QMS84648
UniProt:
A0A7L7KS83
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All DBs
Position
complement(518592..519344)
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AA seq
250 aa
AA seq
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MKFISWNVNGLRACMKKGFASFFEEQDADFVCLQETKMQQHQKEFAFEGYHEFWNDADRK
GYSGTLIYTKHEPLHVQYGLNDGAYNDEGRIITLEYDSFYLVNTYVPNVKRDLSRIPYRM
TYEDRVRAYYVELSQSKPVILCGDLNVAHNEIDLKNDKSNIGNAGFTDEERGKFNELLDA
GFTDTFRHLYPTKEQYSWWSYMFKSREKNVGWRIDYFVVSNRLVPYVQDSIILDHVLGSD
HCPVLLHIDL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatttcatggaatgtaaatggccttcgagcttgtatgaaaaaaggatttgca
tctttctttgaagaacaggatgcggatttcgtatgtcttcaagaaacaaaaatgcaacaa
catcagaaagagtttgcctttgagggttatcatgaattttggaatgatgcagatcgtaaa
gggtactcaggtacgttgatctacaccaaacacgaacccttgcacgtccaatatggattg
aatgatggggcctataatgacgaaggtcgaatcatcaccttagaatacgattccttttat
ctggtgaatacctatgtccccaatgtcaaacgtgatttatcccggattccctatcggatg
acgtatgaagatcgtgtccgtgcctattacgtggaactttcacagtcaaaacctgtcatt
ctttgtggggacttaaatgttgcccataatgaaattgatttaaaaaacgataaatccaac
attggaaacgctggatttaccgatgaagaacggggcaaattcaacgaactactcgatgcc
ggatttactgatactttccgtcatctatatccaacaaaagaacaatactcgtggtggagt
tacatgtttaaatctcgtgagaaaaatgttgggtggcggattgattattttgttgtatcc
aatcgattagtcccctatgttcaggatagtatcattctcgatcacgttcttggtagtgat
cattgtcccgtgttactacacattgatctgtaa
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