Candidatus Xianfuyuplasma coldseepsis: G4Z02_05400
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Entry
G4Z02_05400 CDS
T08386
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xcl
Candidatus Xianfuyuplasma coldseepsis
Pathway
xcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G4Z02_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcl03021
]
G4Z02_05400
03400 DNA repair and recombination proteins [BR:
xcl03400
]
G4Z02_05400
Enzymes [BR:
xcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G4Z02_05400
Transcription machinery [BR:
xcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G4Z02_05400
DNA repair and recombination proteins [BR:
xcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G4Z02_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
HHH_5
RAD51D_N
TfoX_C
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QMS86018
UniProt:
A0A7L7KWB4
LinkDB
All DBs
Position
1134957..1135907
Genome browser
AA seq
316 aa
AA seq
DB search
MKFEKPNTQIEVLNETNTYGKFIVSPLERGYGITLGNSLRRILLSSLPGCAIVNCEIDGV
QHEFSSMDGVVEDVTGIVLNLKEVVLTIDSDDPNVEKRLEIYVEGPQVVTAKDIISDNDV
NIINEDQHICTVNSGTFRMIMTARKGVGYVNADDNKEFITNRSNIGIIPIDSIYTPVNRV
NYDVGPASSGNSGQDKLTLEIWTNGSVNPQEAIAIASKMMIEHLKVMVELSEKVKEEEFM
IEREDEQNSQILEMQIEDLDLSVRSYNCLKRAGINTVEELTQKTEEDMMKVRNLGKKSLK
EVKQKLDELGLGLARH
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattcgaaaaaccaaatactcaaattgaagtattaaatgaaaccaatacatacggg
aaatttatcgtcagcccactcgagcgaggatatggaatcacgttaggaaactccttacgc
cgtatcttactcagcagtttaccaggctgtgccatcgtcaattgcgaaattgatggtgtc
caacatgaattctccagtatggatggtgttgtagaagacgtaaccggtatcgttttaaac
ttaaaagaagtggtcttaaccattgatagtgacgatcccaatgttgaaaaacgtttagaa
atctatgtcgaaggacctcaagtagttacagcaaaagacattatcagtgataacgacgtc
aacatcatcaacgaagaccaacacatctgtacggtaaattcgggaacattccgaatgatc
atgaccgcacgcaaaggtgttggatacgtgaatgcggatgataacaaagaattcattacc
aatcgttccaatatcggaatcattccgatcgacagtatttacacccctgtaaatcgcgtt
aactacgacgtcggccctgcatcctctggaaacagtggccaagacaagttaaccctagaa
atttggaccaacggtagtgtcaacccgcaagaagccattgccatcgcatcaaaaatgatg
attgaacacttaaaagtaatggtggaactaagcgaaaaagtcaaagaagaagaattcatg
atcgaacgagaggacgaacaaaactctcaaatcttagaaatgcaaatagaagacctagat
ctttccgtacgttcctacaactgtttgaaacgtgctggaattaataccgtcgaagaactc
actcaaaaaacagaagaagacatgatgaaagttcgtaacctcggtaaaaaatcactcaaa
gaagtgaaacaaaaactagatgaacttggtcttggacttgcaagacactaa
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