Candidatus Xianfuyuplasma coldseepsis: G4Z02_07250
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Entry
G4Z02_07250 CDS
T08386
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xcl
Candidatus Xianfuyuplasma coldseepsis
Pathway
xcl03030
DNA replication
xcl03410
Base excision repair
xcl03420
Nucleotide excision repair
xcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G4Z02_07250 (polA)
03410 Base excision repair
G4Z02_07250 (polA)
03420 Nucleotide excision repair
G4Z02_07250 (polA)
03440 Homologous recombination
G4Z02_07250 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcl03032
]
G4Z02_07250 (polA)
03400 DNA repair and recombination proteins [BR:
xcl03400
]
G4Z02_07250 (polA)
Enzymes [BR:
xcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G4Z02_07250 (polA)
DNA replication proteins [BR:
xcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G4Z02_07250 (polA)
DNA repair and recombination proteins [BR:
xcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G4Z02_07250 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G4Z02_07250 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
DUF6649
Motif
Other DBs
NCBI-ProteinID:
QMS85544
UniProt:
A0A7L7KU62
LinkDB
All DBs
Position
1492560..1495178
Genome browser
AA seq
872 aa
AA seq
DB search
MKKLILMDGSNVMFRAYYGTAYSGNLMQNSKGQYTNAVFGFVNMMNSVLNEDFTHILVAF
DKSGKTFRHESFPDYKGGRKPMPDEFRSQIDLIKKSLDVLGVKQREIELIEADDIIGTYA
TKYYDQFDEIEIISNDKDLLQLVNDKVHLRSSKKGMQNYVSYTPEYMAETMGVTPDLIPD
LKGLMGDASDNLPGIPGVGEKTAVKLLKQYGSLQGVIDHMDEIKGKLGERIRAHYQDAIL
CKQIATIKTDVSFHFSLDEIEYDGVVEEEMLEFYKELELHSLIKRFNRVQPQPKKTFEYT
LVDTVLDIKDILEPDSCIVLETYGTNYHQAQALGFGVVNDKGSYYIPYEMIHQSMDLQLF
LRDESIPKSVFDWKMMRVVLLNDQYDIQGVTFDLLLAAYILNPNNTKEDFRVIVSNFEYL
DVSYKEEVYGKGAKYAIPTEEAYQMYAVKKAVAIHELKQPLLDQLKDNEQLDLFTDIELP
LSRILAKMEHTGIRVDRDKLQQLNSELKAKIDQITEEIYADAGEEFNISSPKQLGVILFE
KLELPFAKRTKSGYSTKVDILEKLVDHHPIIEKIMTYRTLTKLHSTYIIGLDAAIMDDGR
IHTIYRQAFTSTGRLSSVEPNLQNIPIRYEEGREIRKVFIPEQQHQLLACDYSQIELRVL
AHMANEKVMIDAFKHNEDIHTKTAKQIFDKEDITSLERRQAKAVNFGIIYGQSAWGLSEG
IHINKKEAQLFIDKYYQQFPGIKQFMDGVVEGATSNGYAETIYHRRRYIPELNSSVYMQR
ESGKRNAMNAPIQGSAADIIKIAMIELDRVMKEQKVQSKMLLQIHDELIFDVAPDEIDLM
NDLVTTTMEQCVSLQVPLKVEAVLGDNLYETK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgattttaatggacggatcaaatgtgatgtttcgggcctattatggaacc
gcatattccggaaatttaatgcaaaactccaaaggccaatacaccaatgcagtgtttggc
tttgtcaatatgatgaactcggtactaaatgaagattttacccatatattagtcgccttt
gataaatctggaaagacctttcgccacgaatcatttcccgattataaagggggacgcaaa
ccgatgccggatgagtttcgatcacagattgatttaattaagaaaagtctcgatgttctc
ggggtaaaacaacgtgaaattgagctgatagaagccgacgatatcatcggtacctatgca
actaaatactatgatcaattcgatgaaattgaaatcatcagcaacgacaaagatttgctc
caacttgtcaatgacaaggttcatctgcgttcgagcaaaaaagggatgcaaaactatgtc
tcgtatacgccggagtatatggccgaaactatgggagttactcccgatttgattccggac
ctaaaaggattgatgggggatgcttcggataatctacctggaatacctggagtcggggag
aaaaccgcagtcaagctcctaaaacaatatggtagtttgcagggtgttattgatcacatg
gatgagattaaaggaaaacttggggaacggattcgggcgcattaccaagatgcgatttta
tgtaaacaaatcgcaacgatcaagaccgatgtatcgttccacttctcactggatgaaatc
gagtacgatggtgtcgtggaagaggaaatgttggaattttacaaagaactggaattgcac
tccttaattaaacggtttaatcgcgttcaaccacaaccgaaaaagacctttgagtatacc
cttgtcgatactgtgttggacatcaaggatatattagaaccagacagttgtattgtctta
gaaacctatggtaccaactatcatcaagcacaagcgcttggatttggagttgtcaatgac
aaaggatcgtattatatcccctatgagatgattcatcaatccatggatttacaattgttt
ttacgggatgaatccattccaaaaagtgtgttcgattggaagatgatgcgtgttgtctta
ttaaatgatcagtacgatattcaaggtgttacttttgatttattattagcagcatacatc
ttaaatccaaacaataccaaagaagatttccgagtgattgtcagtaactttgaatatctg
gatgtatcgtacaaagaagaagtgtatggtaaaggagcgaaatacgcgattcctacggaa
gaagcgtatcaaatgtatgcggtcaaaaaagccgtagccatccatgaactgaaacaacca
ttgttggatcagttaaaggacaacgaacaacttgatttgttcaccgatattgaactacca
ttatctcgtattttagcaaaaatggaacatacaggaatacgtgttgatcgtgataaatta
caacaattaaattcggagttaaaagcaaaaatagatcagatcaccgaggaaatctatgcc
gatgcgggagaggaatttaatatttcatcaccgaagcaactcggtgtgattttgtttgag
aaactggagttgccctttgccaaacgaacaaaatcaggctattcaactaaggttgatatc
ttagaaaaattagtcgatcatcacccgattattgaaaaaataatgacctatcgaacctta
acaaaactacacagtacctatatcattgggttggatgctgcgattatggatgatggacga
attcataccatctatcgtcaggcatttacctcgacaggacgactaagtagcgttgagcct
aatttgcaaaatattccgattcgttacgaagaaggaagagaaatacgaaaagtatttatt
cctgaacaacaacatcaattgctcgcctgcgattattcacaaatagagctccgtgtatta
gctcatatggccaatgagaaagtcatgattgatgcgtttaaacacaatgaggacattcat
accaaaaccgcgaaacagatcttcgataaagaggacattacatcccttgaacgacgtcaa
gcaaaagcggtaaactttggaattatatacggtcaaagtgcatggggattgagtgaagga
attcatattaataaaaaagaagcccaactgtttattgataaatactaccagcaatttccg
ggtattaaacaatttatggatggcgttgttgaaggagcgacatccaatggatatgcggaa
accatttatcatcgacgtcgctatattcccgaactgaacagtagtgtctacatgcaacgt
gaaagtggaaaacgcaatgcgatgaatgcaccgattcaaggaagtgcagcagatattatt
aagattgctatgattgaattggatcgtgtgatgaaagaacaaaaagtacaatcgaagatg
ttgctacaaatacatgacgaattaatctttgatgtagcaccggatgagattgatttaatg
aatgatctcgttactacaacgatggaacaatgcgtctcgttacaagtaccgctgaaagtc
gaagcggtattgggagacaatttatacgaaaccaaatag
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