Candidatus Xianfuyuplasma coldseepsis: G4Z02_07360
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Entry
G4Z02_07360 CDS
T08386
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
xcl
Candidatus Xianfuyuplasma coldseepsis
Pathway
xcl00750
Vitamin B6 metabolism
xcl01100
Metabolic pathways
xcl01240
Biosynthesis of cofactors
Module
xcl_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
xcl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
G4Z02_07360 (pdxS)
Enzymes [BR:
xcl01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
G4Z02_07360 (pdxS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
TetR_C_27
NanE
Motif
Other DBs
NCBI-ProteinID:
QMS86034
UniProt:
A0A7L7KVN2
LinkDB
All DBs
Position
complement(1519641..1520516)
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AA seq
291 aa
AA seq
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MQQERYQLNKELAQMLKGGVIMDVTNAEQAKIAEEAGACAVMALERIPADIRAAGGVSRM
SDPKLIKEIQEAVTIPVMAKVRIGHFVEAQILEALEIDYIDESEVLSPADNQYHIDKTAF
KVPFVCGAKNLGEALRRINEGAAMIRTKGEPGTGDVVQAVTHMRLIQSQMRAVKGLRQDE
LFDKAKELQVPYDLLLYVHEHGTLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKS
GNPAQRAKAIVQAVTNYTDATLLATVSEGLGEAMVGINEEEIALLMRNRGE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagaacgttatcaattaaataaagaattagctcaaatgttaaaaggtggtgtc
atcatggatgtcaccaatgcagaacaagcaaaaattgcggaagaagctggtgcttgtgcc
gtaatggccttagagcgcattcctgcggatatccgcgctgctggtggcgtatcacgcatg
agtgatccaaaactaatcaaagagatccaagaagccgtcaccatccccgtaatggcaaaa
gttcgtatcggtcattttgtagaagcacaaatattagaagccttagaaatcgattacatc
gatgaatctgaagtgctatctccagcagacaatcaataccatattgataaaactgctttc
aaagttccctttgtctgtggtgcaaaaaacttaggagaagcactccgtcgtatcaatgaa
ggtgctgccatgatccgtaccaaaggcgaacctggaactggagacgttgtccaagcagta
acccacatgcgattaatacaatcgcaaatgcgcgcagtaaaaggattacgtcaagatgaa
ttatttgataaagccaaagaactacaagtcccttatgatttattattatatgttcacgaa
catggcacattacctgtcgttaattttgctgccggtggagtggcaactcctgccgatgcg
gcactgatgatgcaactcggtgcagaaggtgtctttgtgggatcaggaatctttaaatca
ggaaatccagcacaacgtgcaaaagccattgtacaagccgttacaaactatacagatgcc
acattgttagcaaccgtttctgaaggccttggtgaagcaatggtgggcattaacgaagaa
gaaattgcattgttgatgcggaatcgtggcgaataa
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