Candidatus Xianfuyuplasma coldseepsis: G4Z02_07760
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Entry
G4Z02_07760 CDS
T08386
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
xcl
Candidatus Xianfuyuplasma coldseepsis
Pathway
xcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4Z02_07760 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xcl03019
]
G4Z02_07760 (rny)
Messenger RNA biogenesis [BR:
xcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G4Z02_07760 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QMS85641
UniProt:
A0A7L7KS48
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All DBs
Position
1590201..1591772
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AA seq
523 aa
AA seq
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MLLAFSMINIVSGLAFVAIGILAGFMLSIFIGEKGLLKSRQKADLLIEDARKEAEKNKKQ
TLLETKQEIHNLRMDFDKQIKERKKEADALDDKLLQREQSLDRRSSNLDKRETNIDKKEE
LMERKKQSLDDKNNRLDKLIDEQNEKLLEIARFTMEQARDLIFRRVEDEMASEIAAYIKE
EEEKAKLTADKNAKHLLSQAIQKYAQDVTSERTVSVVSLPNDEMKGRIIGREGRNIRTIE
ALTGIDLIIDDTPEAVVLSGFDPIRREIAKRTIESLVADGRIHPGRIEEVVEKTRSEVDR
FIRDKGEEAVFEVGIGRIHPDLVKLLGRLHFRTSYGQNVLRHAIECAFLAGKLAVEIGED
EVLAKRAGLLHDIGKAVDHEVEGSHVEIGINIANRYKEPFEVIDAIQSHHGEVEAKSIIA
VLVAAADALSAARPGARSESLDSYIKRLEQLENISTEVPGVDQAYAIQAGREVRVIVEPT
KVDDTMAYKIARDIKEKIEEQLSYPGTIKVTVIRETRAQDIAK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctactagcattctcaatgatcaacattgtctctggtctggcatttgtagcaatcggt
atcttagcaggatttatgctaagtatattcattggtgagaaagggcttttaaaatctcgc
caaaaagccgatcttttgattgaagacgcacgaaaagaagcggaaaaaaataagaaacag
acattgctggagaccaaacaagaaatccataatttacgtatggattttgacaagcaaatc
aaagagcgaaaaaaagaagcagatgcgttagatgataaacttctgcaacgtgaacaatcg
cttgaccgccgcagttctaacctcgataaacgggaaacgaatatcgataaaaaagaagaa
ctcatggagcgtaaaaaacaatcactagatgacaaaaataacagactagacaagttgatt
gatgaacaaaacgaaaaactattagaaattgcacgctttacgatggagcaggctagagac
ttgatctttagacgagtagaagacgaaatggcaagtgaaatagccgcatacatcaaagag
gaagaagaaaaggcaaaacttactgctgataaaaatgcaaaacatttactcagtcaagca
atacaaaaatatgcccaagacgttaccagtgaacgtacggtaagtgttgtctcattacca
aacgatgaaatgaaaggacgtattatcggtcgtgaaggacgtaatattcgcacgattgaa
gccttgacaggtattgatttgatcattgacgataccccagaagctgttgttctaagtgga
tttgatccgattcgtcgtgaaatcgccaaacgtaccattgaatcactggttgccgatgga
cgaattcatcctggacgaattgaagaagttgttgaaaaaacacgtagtgaagttgatcgc
ttcattcgtgacaaaggggaagaagccgtattcgaagttggaattggccgaatccaccct
gatcttgtaaaattactagggcgtttacacttccgtaccagctatggacaaaacgtgtta
cgccacgccatcgagtgcgcattcttagctggaaaactagctgttgaaattggcgaagac
gaagttcttgcaaaacgcgctggattacttcatgatatcggtaaagccgtcgatcatgaa
gtggaaggttctcatgtcgaaattggaattaacattgccaatcgttacaaagagccattt
gaagtcattgatgcgattcaatcccatcacggtgaagtggaagcaaaatcaattatcgcc
gtactggttgccgcagctgacgccttgagcgccgcaagacctggtgctcgtagtgaatct
ctcgattcctacatcaaacgactcgaacagctggaaaacatttccaccgaagttcctggc
gtggatcaagcctatgcgattcaagcaggtcgcgaagtgcgtgttattgttgaacccacg
aaagtggatgatacgatggcgtataaaattgctcgtgacatcaaagaaaaaattgaggaa
caactctcgtatcctggaacgattaaagttaccgttattcgcgaaacgagagcccaagat
atcgccaaataa
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