Candidatus Xianfuyuplasma coldseepsis: G4Z02_08935
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Entry
G4Z02_08935 CDS
T08386
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xcl
Candidatus Xianfuyuplasma coldseepsis
Brite
KEGG Orthology (KO) [BR:
xcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcl03016
]
G4Z02_08935 (truB)
Enzymes [BR:
xcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G4Z02_08935 (truB)
Transfer RNA biogenesis [BR:
xcl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G4Z02_08935 (truB)
Prokaryotic type
G4Z02_08935 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QMS85865
UniProt:
A0A7L7KTD2
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All DBs
Position
complement(1827799..1828668)
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AA seq
289 aa
AA seq
DB search
MNGILLVNKPQGMTSHDVVNIVRRLYHTKKVGHTGTLDPDATGLLILGINDGTKIIKFFN
QDEKTYQARIAIGSSTTTLDKTGTVIATKEVTSLEGVDDVLESFKGNYHQTPPMYSAIKY
NGKRLYEYAREGITIEDRPSRDVKIIDIKRISDILYKNNHAYFDYLVYGTKGLYVRTLSY
DIGAKLGYPAHNYELHRIQAGPFHIKDSYTLDDLKNDIPTPIPLGDALSFLPAIMADETI
YDDVRHGRALDRIVEGPVRILDSNSNLLAVYDNHPDKPLLKAINVFIKE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaatcctattggtaaacaaaccgcagggaatgacatcccatgatgtggtgaat
attgttcgtagattatatcataccaaaaaagtcggtcacactggaacattggatccggat
gcgactggtttgctcatacttgggattaatgatgggacgaaaatcatcaagttctttaat
caagatgaaaaaacctatcaagctcgcattgccatcggttccagcacaacaaccctagat
aaaacaggaaccgtaattgcgaccaaagaagtgacatcattagaaggtgttgatgatgtt
ttagaatcctttaaaggcaactatcatcaaacaccaccaatgtactccgccatcaaatat
aacggtaaacgattatatgaatatgctcgcgagggaatcacaattgaggatcgtccctca
cgagacgtgaaaatcattgacatcaagcggatatctgatattctatacaagaacaatcat
gcctattttgattatctcgtgtatggtacaaaaggattatatgtccgtaccctatcctat
gatattggtgcgaaattggggtatccggctcataattacgaattacaccggattcaagcg
ggaccattccatattaaagatagctataccttggacgatttaaaaaacgatatcccaacg
cccatcccacttggggatgccttatcgtttctgccagcgataatggctgatgagacaatc
tatgacgatgtccgacatggtcgagcattggatcgaatagtagaaggtccagtgcggatt
ctcgattcgaatagcaacctacttgcggtttatgataaccatcctgataaaccgttatta
aaagctataaatgtatttataaaggaatga
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