Xanthomonas citri pv. citri MN12: J164_00244
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Entry
J164_00244 CDS
T03735
Name
(GenBank) Ku protein, prokaryotic
KO
K10979
DNA end-binding protein Ku
Organism
xcm
Xanthomonas citri pv. citri MN12
Pathway
xcm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J164_00244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcm03400
]
J164_00244
DNA repair and recombination proteins [BR:
xcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J164_00244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
QueG_DUF1730
SPT2_N
Motif
Other DBs
NCBI-ProteinID:
AJY93570
UniProt:
A0A0U5FFE3
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All DBs
Position
154922..155881
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AA seq
319 aa
AA seq
DB search
MARPIWTGTLSFGLLNVPVSLMSGERKVDLHFRMLDSRDKKPIRFERVNADTGDEVPWKE
IVKAFEYDKGSYVIVEEQDIRSAAPESHETVEVETFVDAADIDPRYFEKPYILVPGKKAE
KGYVLLRETLRDTGKVGIAKVVIRTREYLAAVMPQGDALILLLLRYQQEVVDPQDFKLPA
GAVGEYRITPKEQEMAKQLIESMSGTWQPEDYHDEFRGKLEKILRRRIQEKGGTTTVDVE
PPQHEDATTNVVDFMSLLQKSLQANTRTPAKKSSTADTASAPAKKTATKKAAKKAVKKAA
GKTTKKTAAKTAAPRRKAG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaccgatctggaccggcaccctttccttcggcttgctcaacgtgccggtgtcg
ttgatgtcgggcgaacgcaaggtggatctgcatttccggatgctggattcgcgcgacaag
aaaccgatccgcttcgaacgcgtcaatgccgacaccggcgacgaggtgccgtggaaggag
atcgtcaaggcattcgaatacgacaagggcagctacgtcatcgtcgaagaacaggatatt
cgctctgcggcgccggaaagccatgaaacggtagaggtggaaaccttcgtcgatgcagcc
gacatcgatccacgctatttcgaaaagccctacatcctggtgccgggcaagaaggccgaa
aagggatacgtgctcttgcgcgaaaccttgcgcgacaccggcaaggtgggcattgccaag
gtggtgatccgcacccgcgagtatctggcggcggtgatgccgcagggcgatgcattgatc
ttgttgctgctgcgttatcagcaggaggtggtggacccgcaggatttcaaactgccggcc
ggtgcggtgggcgagtaccgcatcacgcccaaggaacaggagatggccaagcagctgatc
gagtcaatgtccggcacctggcagccggaggattaccacgacgaattccgcggcaagctg
gaaaagatcttgcgcaggcgcatccaggaaaagggcggcaccaccaccgtggacgtcgag
ccccctcagcacgaagacgccaccaccaacgtggtggacttcatgtcgttgttgcagaag
agcctgcaggccaatacgcgtacgccagccaagaaatccagcacggccgacacggcaagc
gcacccgcgaagaaaacggcaaccaaaaaagcggcgaagaaggccgtcaagaaggcagca
ggcaagacgaccaagaagactgcggccaagacggccgcgcccaggcgcaaggcggggtag
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integrated database retrieval system
