Xanthomonas citri pv. citri MN12: J164_03704
Help
Entry
J164_03704 CDS
T03735
Name
(GenBank) Head domain of trimeric autotransporter adhesin/Coiled stalk of trimeric autotransporter adhesin/Extended Signal Peptide of Type V secretion system
KO
K21449
trimeric autotransporter adhesin
Organism
xcm
Xanthomonas citri pv. citri MN12
Brite
KEGG Orthology (KO) [BR:
xcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcm02000
]
J164_03704
Transporters [BR:
xcm02000
]
Other transporters
Pores ion channels [TC:
1
]
J164_03704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
ESPR
Motif
Other DBs
NCBI-ProteinID:
AJY96964
LinkDB
All DBs
Position
complement(4168444..4175016)
Genome browser
AA seq
2190 aa
AA seq
DB search
MNRIYRKVWNKSLGVWAVASELASGDSPGAVASAAFIDRRQSLALAAAIALALGGAGLAT
PLPANAQSVEVGRGAAAPASRATAIGANSHASATGAVATGADSSASGVNSSAIGRQTNAI
GENAVAIGYNSFVRQSGENGVALGANAGVTGANSVALGAGSRTHEDDVVSVGSGNGRGGP
ATRRITNVTAGVNATDAVNVAQLRDVADVAEDTATFFKATPGEDSVGAYVEGDSALAAGD
AANAVGTATTALGTGANAVAANATAVGANALASGQNSAAFGHNAQANGPASVAVGGAAVD
EDGEPLVTKGGVPVTTGATSAGVGGTAVGASANADGFAASSFGVGAYAAGAQASAFGAVA
NAGGDYATAVGTQTSASGTSSTAVGGPVDLIPGLGFFVQTQASGEASTALGAGAIASGTY
TTAVGTLSEASGTEATAVGYFAYAPGEGATAVGPESWASGELSTALGYYSTARGANSVAL
GANSVATRANTVSVGAAGDERQVTNVAAGTEGTDAVNLDQLTAVSEVASTTARSFVATGE
GAALAQGVDSVAAGSNASAYSDYSTALGSSSAASAQGATAVGSGANATTDNATAVGFNST
AVAENTTALGGNSSASGDGSTAVGGASQATASGATALGYESIANGADSTAVGAGSVAFGD
TSTAVGGASVAFGADSAAFGANAAAGGTASTAIGANSSAFGERTVALGGASNASGDDSIA
LGASSQASALGTTAVGSNANASIANATAVGFNSSAGDDYATALGGDSNASGYFSTAVGGT
SIANGRGATAIGYESIGNGTASTALGFASVAWGDGGTAIGTESLAYGDDSTAVGANAAAA
DTGSIAVGTYANAFGPRAISLGGQSRATGDESIALGWEASAFGTHSVSLGGGAVASADNS
VALGAGSIADRANTVSVGAAGTERQIANVAAGTEGTDAVNLDQLNAVAGAAENTARLFAG
TGTGTADAQGEDATAAGSNATADGDYGSAFGSSSQATAIGAVAIGSGASATAQYADAAGY
NAAASGFGSVSNGAFSQASGDYAVAVGGESEAAGAQSTALGAAAGAYGDGSLAVGALSQA
QGSESTAMGYFASASGESATAVGAESVANGTSAAAFGFGAEATSNYSTALGGYSSASGFN
STALGNFSTASGSNTVAVGGDAAATGAYSIAAGQGSVASGYNSVSVGGALLGLLPTEASG
DYSTAVGGAAWAPGLNSTALGNFAESTGESSVALGADSVADRDFAVSVGSAGNERQITNV
AAGTQGTDAVNLDQLNAVAEAGAATSKYFQASGSADSDAGAYVEGENALAAGEGANATGT
GTTALGAGAQAVVDNATAVGVGALAGGTGAAALGNNAQAVGENSSAVGSNALASEIGATA
NGAGAQAISTYTTALGSEAVASDNQAIAAGFRSTASNVGSAAFGGYSESTGRLSSALGYG
AVASSDYSTAVGAVALASGASAVAVGEFSEATGDESVAVGGSTFFGFIPARASGTGAAAF
GAGAWATADYTTAIGWNSYADGVNASALGQSAAALADNTLALGGGSRADAVGASVVGVDA
SATGINSTGVGRQVNAIGENAVSVGYNSFVRQSAVNGVALGANAGATGADSVALGSGSRT
YEADTVSIGSGNGRGGPATRRIVNVSDGQAATDAVNKGQLDALAADVQTTSGMLKTTGDG
VASATGDRATAAGAGATASGARSVAVASGSRASATGASAMGVDSSASGVNSTAMGRQTNS
IGENGVALGYNSFVRESGSNAVALGANAGASGADSVALGSGSRTYDANTVSVGSGNGRGG
PATRRIVNVGAGTIASASTDAINGGQLFQSLSNAASFLGGGAAIGAQGVFVAPTYVIQGA
SYNNVGAALTALDSKVSELDARSGGTAASTAARTASLRTATVPAVAATAVSDVSSNVAST
ASDVTASVQGTPTAAMDGSITPAATSTAVGTTAVANHITGTAIGGSAYAHGPNDTAIGSN
ARVNADGSTAVGANTQIAAVATNAVAMGEGAQVTAASGTAIGQGARATAQGAVALGQGAV
ADRANTVSVGSVGGERQVANVAAGTRATDAVNKGQLDSGVAAANSYTDSRYNAMADSFES
YQGDIEDRLRRQNRRLDRQGAMSSAMLNMSASVAGIASQNRIGAGVGFQNGESALSVGYQ
RAISPRATVTVGGALSGDDSSIGVGAGFGW
NT seq
6573 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggatttatcgcaaggtctggaacaaatcgcttggtgtgtgggccgtagcctcg
gaattggccagcggcgacagccccggagcggttgcctcagccgcgttcatcgatcgccgt
cagagcctggcactcgcggccgccatcgctctggcgctaggtggcgccggattggcaacg
ccgcttcctgccaatgcgcaatcggtcgaagtgggccgcggcgcagcggcgccggccagc
agggccaccgccatcggcgccaatagccacgccagcgccaccggtgccgtggccaccggc
gccgacagcagcgccagtggcgtcaacagcagcgcgatcggtcgccagaccaatgcgatc
ggcgaaaacgccgtggccatcggctacaacagtttcgtgcgccaaagcggcgaaaacggc
gtggcgctcggcgccaatgcgggggtgaccggcgcaaattcggtggcgctgggcgcaggc
tcgcgcacccacgaagacgacgtggtgtcggtgggcagcggcaatggccgcggtggcccg
gccacgcgccgcatcaccaacgtcactgccggcgtcaatgccaccgatgcggtcaacgtt
gcgcagttgcgcgacgtggccgatgtggccgaagacacggccacattcttcaaggcgacc
ccgggcgaagacagcgtcggcgcctatgtcgaaggcgacagcgcgctggccgccggcgat
gccgccaatgccgtgggcacggcgaccaccgcgctgggaaccggcgccaatgcggtggcc
gccaatgccaccgcggtcggcgccaatgcgctggcctcgggccagaacagcgcagcattc
ggccacaacgcacaggccaatggtccggcgagcgtggccgtgggcggcgctgcagtggac
gaagacggcgagccgttggtcaccaaaggcggcgtgccggtcaccaccggcgccaccagt
gccggcgtcggcggaaccgcagtcggcgccagcgccaatgccgatggctttgcggcctcg
tcgttcggcgtgggtgcatacgccgcaggcgcgcaggcatctgcgttcggtgcggtcgcc
aatgcggggggcgattacgccactgcggttggcacccagaccagcgccagcggcaccagc
agcactgcagtcggcggcccggtggacctcatccccggtctgggcttcttcgtgcagacc
caggccagtggcgaagcctccaccgcgctcggcgccggcgcgattgcgtcgggcacgtac
accactgcggtcggcacgctgagcgaagcctccggcaccgaagccaccgcggtgggttac
ttcgcctatgcgcccggcgaaggcgcaacggccgtgggcccggaatcatgggccagcggc
gaactgagcacggcgctggggtattacagcactgcccgcggcgccaattcggttgcgttg
ggtgccaactcggtcgccacgcgcgccaacaccgtgtcggtgggcgcagccggcgatgag
cgtcaggtcaccaacgtcgccgccggcaccgaaggcaccgatgcggtgaatctcgaccag
ctcaccgcagtgtccgaggttgcctccaccaccgcgcgctcgttcgtcgccaccggcgag
ggcgctgcgcttgcccaaggcgtcgacagcgtcgcggccggttccaatgcatcggcctac
agcgactacagcaccgcgctgggttccagcagcgcggcatctgcgcagggtgcaactgcc
gttggcagtggcgccaatgccaccaccgacaacgccacggcagtcggcttcaacagcacc
gcggtcgcggaaaacaccacggcgcttggcggcaacagcagtgcctctggcgatggcagc
accgcggtcggcggcgcaagccaggccaccgccagcggcgcgacggcgctgggctacgag
agcatcgccaatggcgcagactccacggcagtgggtgcgggtagcgtggcattcggcgac
accagcaccgccgtgggtggtgcaagcgtggccttcggtgccgatagcgcggccttcggc
gccaatgccgcggccggtggcactgcatccaccgcgatcggcgcaaacagcagcgccttc
ggcgagcgcaccgttgcgctgggcggcgccagcaacgcgtcgggcgatgacagcattgcg
ctcggtgcaagcagtcaggcctctgcgctaggcaccacggccgtcggcagcaatgccaac
gccagcattgccaatgccactgcggtcggtttcaacagcagtgccggcgatgactacgcc
accgcactcggcggcgacagcaacgcatcgggatatttcagcaccgccgtgggcggcacc
agcatcgccaatgggcgtggtgcaacggcgatcggctacgaaagcatcggcaatggaact
gcatcgaccgcgctgggttttgccagtgtggcgtggggtgacggcggcaccgccatcggt
accgaaagtcttgcctacggtgacgacagcacggcagtgggcgcgaatgcggctgcggcc
gataccggatcgattgcggtgggcacctacgcaaatgcatttggtccgcgtgccatttcg
ctcggcggccaatccagggcgaccggcgatgaaagcatcgcactgggttgggaagccagc
gcattcggtacgcacagcgtcagcctgggcggcggtgcggtggcatctgccgacaacagt
gtcgcgctgggtgcaggttcgatcgccgatcgcgccaacacggtgtcggtgggtgcagcc
ggcaccgagcggcagattgccaatgttgctgcgggcacggagggcaccgatgcggtgaac
ctggaccagctcaacgccgtggctggcgccgctgaaaacaccgcgcgcctgttcgccggc
accggcaccggcacagccgatgcgcagggcgaagacgcgaccgccgctggctccaatgcc
acggccgatggcgattacggcagcgcgttcgggtccagtagccaggccaccgccatcggt
gcggtggcgatcggcagcggcgccagcgccaccgcgcaatacgccgatgcggccggttac
aacgcagcggccagcggctttggcagcgtgtccaatggcgccttcagccaggccagcggc
gactatgccgtggccgtgggtggcgaaagcgaagcggccggtgcgcagagcaccgcgctt
ggtgccgccgccggtgcgtatggcgatggctcgctggcggtcggtgcgctgagccaagcg
cagggcagcgaatccactgccatgggctatttcgccagcgccagcggcgaatcggccacc
gccgtcggcgcggagagcgttgccaacggcaccagcgccgcggcgttcggcttcggtgcc
gaggcgacgtccaactactccaccgcgttaggtggatattccagcgccagcggtttcaac
agcaccgcgctgggtaacttcagcaccgccagcggttcgaacacggtggccgtgggtggt
gatgccgccgccacgggtgcctacagcatcgccgcgggccagggcagtgtggccagcggc
tacaacagcgtgtcggttggtggtgccttgctcggcctgttgccgaccgaagcctccggc
gattactccaccgcagtgggcggcgcggcatgggcaccgggtctcaacagcacggcgctg
ggcaatttcgccgagtccaccggcgaaagcagcgtggccttgggcgccgactcggtggcc
gatcgcgacttcgcggtgtcggtgggcagtgccggcaacgagcgtcagatcaccaacgtg
gcggccggcacgcagggcaccgatgcggtgaacctggatcagctcaacgccgttgccgaa
gccggtgcagccacgagcaaatacttccaggccagcggcagcgccgatagcgatgcaggt
gcctacgtcgagggcgaaaacgcgctggcggcaggcgagggtgccaatgccaccggtacc
ggcaccaccgcattgggtgcgggtgcgcaggcagtggtggacaacgccacagccgtaggc
gtgggcgcattggctggcggcaccggcgcggcagcgctgggtaacaatgcccaggcggtg
ggcgaaaacagcagtgcggtcggcagtaacgcgttggccagcgagatcggcgccacggcg
aatggtgccggcgcgcaggcgatttcgacctacaccactgcactgggcagcgaagcggtg
gcgtccgacaatcaggccatcgctgcgggtttccgcagtaccgcgtccaatgtcggtagc
gctgccttcggtggctacagcgaatcgaccggccgcctgtcgtctgcactgggctatggc
gcggtcgcgtcgagcgattacagcactgccgtcggtgccgttgcgttggcctccggtgcc
agcgcggtcgccgttggcgaattcagcgaagccactggcgatgagagcgtggccgtcggc
ggcagcacgttcttcgggttcatcccggcacgggcctccggcacgggcgcagcggcattc
ggtgccggtgcctgggccacggcggactacaccactgccatcggctggaattcctatgcc
gacggcgtcaatgccagcgcgttgggccagagcgcagcggcgcttgccgacaacaccctg
gcgttgggtggcggcagccgcgctgatgcagtcggtgccagtgtggtcggtgtggatgcc
tcggccaccggcatcaacagcaccggcgtcggtcgtcaggtgaatgccatcggcgaaaat
gcggtgtcggtgggctacaactcgttcgtgcgccagagcgcggtcaacggcgtggcactg
ggtgccaatgctggtgcgaccggtgccgattcggtggcattggggtctggctcgcgcacc
tacgaagccgacacggtgtcgatcggtagcggcaatggccgcggcggtccggccacgcgc
cgcatcgtcaacgtcagcgacggccaggcggccaccgacgcggtcaacaaggggcaactc
gatgccctggcggccgatgtgcagaccaccagcggcatgctgaaaaccaccggcgacggc
gtggcctcggccaccggcgatcgcgccacggcggcaggtgccggcgccaccgccagcggt
gcacgcagcgtggcggttgcctccggcagccgtgcctcggccaccggcgccagcgcgatg
ggtgtggacagcagcgccagcggcgtgaacagcaccgcgatgggccggcagaccaattcc
atcggcgaaaacggcgttgcgctgggctacaactccttcgtgcgcgaaagcggcagcaat
gccgtggcattgggtgcgaatgccggtgccagcggtgccgattcggtggccctgggctcg
ggctcgcgcacctacgatgccaatacggtgtcggtgggcagcggcaacggtcgcggcggc
ccggccacgcgccgtatcgtcaacgtaggcgctggcacgattgccagtgccagcacggat
gcgatcaatggcggccagttgttccagtcgctgagcaatgcggccagcttccttggcggc
ggtgcggcgatcggtgcgcaaggcgtgttcgtggcgccgacctatgtgatccagggcgcc
agctacaacaacgtcggtgcggcactgacggcgttggacagcaaggtcagcgagctggat
gcacgcagtggcggcactgccgccagcaccgccgcacgcaccgcatcgctgcgcaccgca
acggtgccggcagtggcggcaactgcggtcagcgatgtgtccagcaatgtcgcaagcact
gcgagcgatgtaacggcctctgtgcagggcacgcccaccgccgcaatggacggcagcatc
acgccggcggccacgtccacggcagtcggtacgacagcagtggccaaccacatcaccggc
acggcgattggcggcagcgcgtatgcgcatggccccaacgacaccgccatcggcagcaat
gcgcgcgtcaatgccgatggcagtacggcggtgggcgccaacacgcagatcgcggcggtg
gcgaccaatgccgtggcgatgggtgagggcgcgcaggtgacggccgcgtccggcaccgcg
atcggccagggcgcacgtgccacggcacaaggcgcggtggcactgggtcagggcgcggtt
gccgatcgtgccaacacggtgtcggtgggcagcgtgggcggtgagcgtcaggtggccaac
gtggctgccggtacgcgtgccaccgatgcggtcaacaagggccagttggacagcggcgtt
gccgccgccaacagctacaccgacagccgctacaacgcgatggccgacagcttcgaaagc
taccagggcgatatcgaagaccgcctgcgccggcagaaccgtcgcctggaccgtcagggt
gcgatgagctcggcgatgttgaacatgtccgccagcgtggccggtatcgcctcgcagaac
cgcatcggtgccggcgtcggtttccagaacggcgagtcggcgttgtcggtgggctaccag
cgtgcgatcagcccgcgcgccaccgtcaccgtgggcggcgcgctcagcggcgacgacagc
tcgatcggcgtgggtgccggtttcggctggtaa
DBGET
integrated database retrieval system
