Xanthomonas citri pv. citri MN12: J164_04279
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Entry
J164_04279 CDS
T03735
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xcm
Xanthomonas citri pv. citri MN12
Pathway
xcm03420
Nucleotide excision repair
xcm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J164_04279
03430 Mismatch repair
J164_04279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcm03400
]
J164_04279
Enzymes [BR:
xcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J164_04279
DNA repair and recombination proteins [BR:
xcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J164_04279
MMR (mismatch excision repair)
Other MMR factors
J164_04279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AJY97529
UniProt:
A0A0U5BZ64
LinkDB
All DBs
Position
complement(4827691..4829862)
Genome browser
AA seq
723 aa
AA seq
DB search
MLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAVTFTNK
AAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQLRLVKR
VVQALELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQERCDRS
GLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGESGNVF
VVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAHNPDRI
GKQLWTDSGNGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQSRALE
EALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIGDRTLD
EVRRLARASALSLWEAAMLCTQQNTLAARARNALATFLSLIGQLHAETGEMELAERIDHV
LMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFLAYASL
EAGAGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEERRLAY
VGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRTASLGAAR
GGPVHGIVETAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVMAYANL
TVV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgatcatttaaaccccgcccagcgcgaggccgtttctgcgccgccggggcactac
ctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatccatcgcatcgcctgg
ctcaatgaagtccagggcgtgcccaaccacggcatcttcgcggtgaccttcaccaacaag
gccgccggcgaaatgcgtcaccgtaccgacctgcagctgcgcaatggcagccgcgggatg
tggatcggtacatttcacgggctggcacatcgcctgttgcgtctgcattggcaggatgcg
cggctgccggaaggcttccaggtcatggacagcgacgaccagttgcggctcgtcaagcgc
gtggtgcaggcgctggagctggacgagagcaagtatcctcccaagcagatgagctggtgg
atcaacgagcagaaggatgagggccgccgtccgcagcatatccagcccgagcccaacgac
gattggaccgaggtgcgccggcaggtgtatgcggcctaccaggaacgctgcgaccgctcc
gggctgctggatttcgccgagttgctgctgcgcgcgcatgagttgctgcgcgacacgccg
gcattgctggcgcattaccgcgcgcgcttccgcgagattctggtggacgagttccaggac
accaacgccatccagtacgccttcgtgcgcgtgctggccggcgagtcgggcaatgtgttc
gtggtcggcgacgacgaccaggccatctatggctggcgcggcgccaaggtcgaaaacgtc
cagcgctttctgaaggatttccccggtgcgcagaccgtgcggctggagcagaactaccgt
tccagcgcgaatattctgggcgctgccaatgcggtgattgcgcacaacccggaccgtatc
ggcaaacagctgtggaccgattcaggcaatggcgacccgatcgatctgtacgcggcctac
aacgaagtggacgaagcgcgctatgtggtcgagcgtgcacggcagtgggtgcgcgacggc
ggcagttatggcgaagtggcggtgctctaccgcagcaacgcgcaatcgcgcgcgctggaa
gaagcgctgatttccgagcagttgccgtaccgcgtgtatggcggcatgcgtttcttcgaa
cgtgccgaaatcaaggacgcgttggcttacttgcgtctgctgaccaatcgcagcgacgac
gctgcgttcgaacgcgcggtcaacacgcccacgcgcggcattggcgatcggacgctggat
gaggtgcgccggctggcacgtgccagtgcgctgtcgttgtgggaagcggcgatgctgtgc
acgcagcagaacacgctggccgcgcgcgcacgcaatgccctggccaccttcctcagcctg
atcggccagctgcatgccgaaaccggcgagatggaactggccgaacgcatcgaccatgtg
ctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgcggcgggctggattcg
gaatcgcgtaccgagaacctggacgaactggtgtcggtcgcctcgcgcttcacccgcccg
gacgatgaagacagccagggcatgaccgagctggtcgccttcctggcttacgcctcgctg
gaggccggcgcaggccaggcgcaggctggcgaagaaggcgtgcagctgatgacgctgcat
tcggccaagggcctggaatttccgattgtgttcctggtcggcctggaagacggcctgttt
ccgagtgcgcgctcgctggaagagagcgggcggctggaagaagagcgtcgcctggcgtac
gtgggcatcacccgcgcgcggcagaagctggtgctgtgctacgccgaatcgcgccgtatc
cacggccaggacaattacaacgtgccctcgcgcttcctgcgtgagattccgcgcgacctg
ctcaacgaagtgcgcccgaaggtgcaggtttcgcgcaccgcatcgctgggcgcggcgcgc
ggcggcccggtgcatggcatcgtggaaacggcaccgatcaagctcggcgccaacgtcgaa
caccccaagttcggcggcggcgtggtcgtcgattacgaaggcgctggcgcgcatgcgcgc
gtgcaggtgcagttcgacgaggtcggcgccaagtggctggtgatggcctacgccaatctg
actgttgtctag
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