Xanthomonas citri pv. citri NT17: J169_00339
Help
Entry
J169_00339 CDS
T03734
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K02481
two-component system, NtrC family, response regulator
Organism
xcn
Xanthomonas citri pv. citri NT17
Brite
KEGG Orthology (KO) [BR:
xcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xcn02022
]
J169_00339
Two-component system [BR:
xcn02022
]
NtrC family
Unclassified
J169_00339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA
AAA_16
HTH_30
HTH_28
AAA_2
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJY89194
LinkDB
All DBs
Position
274394..275740
Genome browser
AA seq
448 aa
AA seq
DB search
MARILIIDDDAAFRTTLQATLRSLGHTAVAAENGPDGLARLSEGGIDMAFVDFRMPGMDG
IAVLRARLDDAQARQVPLVMLTAHVSSGNTIEAMTLGAFDHLVKPVGRADIVEVVERALL
SRAEAQAAATDALSAPVEDDDALVGHSPAMRTVHKRIGLAAASDLPVLITGETGTGKELA
ARALHRASPRASAPFAAVNCAAIPLELMESELFGHRKGAFSGASSDRRGLIREADGGTLF
LDEIGDMPLPMQAKLLRFLQEGEVTPLGGSGPQKVDVRVLAATHRDLAACVADGRFRSDL
RYRLNVVPIELPPLRERGQDILLLAQHFLSANAARAQSLSPAAQERLLAHLWPGNVRELR
NVMQRSQVLVRGASIDAADLEEALGEAGEAPPNGASALTGTLPEAVAQLEKRMIQSALEQ
SQGNRAEAARRLGIHRQLLYRKLEEYGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatcctgatcatcgatgacgatgccgcgtttcgcaccaccttgcaggccacc
ttgcgctcgctcgggcatacggcggtcgccgccgagaatgggccggacgggctggcccgg
ttgagcgaaggcggcatcgacatggcgtttgtggatttccgcatgccgggcatggatggc
atcgcggtgctgcgcgcgcgcctggacgatgcgcaggcgcgtcaggtgccgctggtgatg
ctgaccgcccatgtgtccagcggcaacacgatcgaggcgatgacgctgggcgccttcgat
catctggtcaagccggttggtcgtgccgacatcgtggaggtggtggagcgcgcactgctc
agtcgcgccgaggcgcaggctgcagcgacagacgcgttgtctgcgccggtcgaggacgac
gatgcactggttggccacagcccggcgatgcgcaccgtgcacaagcgcatcggcttggcg
gccgcctctgatctgccggtgctgatcaccggggaaaccggcaccggcaaggaattggcg
gcacgcgcgttgcatcgcgccagcccgcgcgccagtgcgccattcgctgcagtcaactgc
gcggccattccgctggaattgatggagagcgagctgttcggccatcgcaagggtgcgttt
tccggcgccagcagcgaccgacgcgggttgattcgcgaagccgatggcggcacgttgttt
ctggacgaaatcggcgacatgccattgccgatgcaggccaagctgctgcgtttcctgcag
gaaggcgaggtgacgccattgggtggcagcggcccgcagaaggtggatgtgcgggtgctg
gccgccacccatcgcgacctggcggcctgcgtggccgacgggcgctttcgtagcgatctg
cgttaccgcctcaatgtggtgccgatcgaactgccgccattgcgcgagcgtggccaggac
atcctgttgctggcgcagcacttcctgagcgccaatgcagcgcgtgcgcagagcctgtcg
ccggccgcgcaggagcgcctgctcgcgcacctctggcctggcaatgtgcgcgaattgcgc
aacgtcatgcagcgcagccaggtgttggtgcgtggcgccagcatcgatgcggcggatctg
gaggaagcgctgggcgaggctggcgaggcgccgccaaatggtgcatcggcgttgaccggc
accctgcccgaagcggtggcgcagctggaaaaacggatgatccagtcggcgctggaacag
agccagggcaatcgggcagaggccgcgcgccggttggggatccaccggcaattgctctat
cgcaagctggaggaatacggcttgtga
DBGET
integrated database retrieval system
