Xanthomonas citri pv. citri NT17: J169_01319
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Entry
J169_01319 CDS
T03734
Name
(GenBank) Excinuclease ATPase subunit
KO
K03701
excinuclease ABC subunit A
Organism
xcn
Xanthomonas citri pv. citri NT17
Pathway
xcn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J169_01319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcn03400
]
J169_01319
DNA repair and recombination proteins [BR:
xcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J169_01319
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J169_01319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_21
DnaJ_CXXCXGXG
AAA_16
AAA_29
DUF4350
Motif
Other DBs
NCBI-ProteinID:
AJY90151
UniProt:
A0A0U5FAT3
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All DBs
Position
1351250..1353778
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AA seq
842 aa
AA seq
DB search
MSNATSSSGLVRVRGAREHNLKNVDVDVPRDALVVFTGVSGSGKSSLAFGTIFAEAQRRY
LDSISPYARRLIDQVGVPEVDSIDGLPPAVALQQARGAPSARSSVGSVTTISNSLRMLYS
RAGQYPPGQEIIYADGFSPNTPAGACPTCHGLGRIYDATEATMVLDRSLSIRDRAVAAWP
GAWHGQNQRDILTTLGHDVDAPWHTLPKKTRDWILFTDEQPVVPVYAGYNVAEVRRALKR
KEEPSYMGTFTSARRYVLHTFATTQSAQMKKRVAQYLLSTQCPQCDGKRLRREALSVTFA
GLDIGELSRRPLDEVAELLRPAAEATPSKGTRKGAHQHPEQVIAAQRIAADLRARIAVVQ
ALGLGYLSLERSTPTLSPGELQRLRLATQIRSQLFGVVYVMDEPSAGLHPADAQALLGAL
DQLKAAGNSVFVVEHEVDVIRHADWIVDVGPAAGAQGGQVLYSGPPAGLEQVQASSTRRY
LFGTPPQVHRPARAANGWLQLRGITRNNVRALDVDLPLGVFTTVTGVSGSGKSSLVSQAL
VELLAAHLGQAQAEDEEALDPLERGTQVPLEGAIVAGLDRVRRLVRVDQKPIGRTPRSNL
ATYTGLFDPVRKLFAATPAARRRRYDPGQFSFNVAKGRCATCEGEGSVYVELLFMPSVYA
PCPTCHGARYNAKTLEIALRGRNIAQVLEMTVDQAAIFFADDAGVLRPLQVLREVGLGYL
RLGQPATELSGGEAQRIKLATELQRAQRRDTVYVLDEPTTGLHPSDVDTLMAQLQGLVDA
GNTVIVVEHDMRVAASSDWVLDMGPGAGGVGGHVVVAGPPDVVARHRGSRTAPFLAQVLR
GE
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgcgacgtcttccagtggcctggtgcgcgtacgcggcgcgcgcgagcacaac
ctcaagaacgtggatgtggatgtcccccgcgatgcactggtggtgttcaccggcgtttcc
ggatcgggcaagtcgtcgttggcgttcggcaccatctttgcagaggcgcagcggcgctat
ctggattcgatctcgccgtatgcgcggcgcctgatcgaccaggtaggcgtgccggaggtg
gattccatcgatggcctgccaccggcggtggccctgcagcaggcccgcggcgcgcctagc
gcacgctcgtcggtgggcagcgtcaccaccatctccaactcgttgcgcatgctgtattcg
cgtgccggccagtatccgccggggcaggagatcatctacgccgacggtttttcgccgaac
acgcccgcgggggcatgccccacctgccacggcctggggcgcatctatgacgccaccgaa
gcgaccatggtgctcgaccgcagcctgagcattcgcgaccgtgcggtcgccgcctggccg
ggcgcatggcatgggcagaaccagcgcgacatcctcaccacgctgggccatgacgtggat
gcgccatggcacacgctgccgaagaaaacccgcgactggatcctgtttaccgacgaacag
ccggtggtgccggtatacgccggttacaacgtggccgaggtcaggcgcgccctcaagcgc
aaggaagagcccagctacatgggcacgttcaccagtgcgcggcgttatgtgctgcacacc
ttcgccaccacccagagcgcgcagatgaaaaagcgcgtggcgcagtatttgctcagcaca
caatgcccgcagtgcgatggcaagcgcctgcgccgcgaggccttgtcggtcacctttgcc
gggctggatatcggggagctgtcgcggcgccccctggacgaggtggccgagctgctgcgc
cccgccgccgaagccacgccatccaaaggtacgcgcaagggtgcgcaccagcatccggaa
caggtgatcgccgcgcaacgcatcgctgcggatctgcgcgcgcgaatcgccgtcgtacag
gcactgggtctgggctacctcagcctggagcgcagcacgcccaccttgtcgccgggcgag
ttgcaacggctgcggctggccacgcagatccgctcgcagttgttcggcgtggtgtacgtg
atggacgaaccatcggccggcttgcatcccgccgatgcgcaggcgctgctgggtgcgttg
gatcaactcaaggcggcgggcaattcggtcttcgtggtcgaacacgaagtggacgtgatc
cgccatgcggactggatcgtggatgtaggcccggcggccggcgcgcagggcgggcaggta
ctttatagcgggccgcccgcaggcttggagcaggtgcaggcctcgtccacacgtcgctat
ctgttcggcacgccgccgcaagtgcatcgcccggcgcgcgcggcaaacggttggttgcag
ctgcgcggcatcacccgcaacaacgtacgcgcgctggatgtggatctgccgttgggcgta
ttcaccactgttaccggtgtgtccggctcgggcaaatcctcgttggtgagtcaggcgctg
gtggaactgctggccgcccatctggggcaagcgcaggcagaggacgaagaagcgctggat
ccactggagcgcggcacgcaggtgccgctggagggtgcgattgtggccgggctggatcgg
gtgcgccggctggtgcgcgtggatcaaaaacccatcggccgcaccccgcgctccaatctg
gccacatacaccggcctgttcgatccggtgcgcaagctgtttgcggccacgccggccgca
cgccggcgccgctacgacccggggcagttctccttcaacgtcgccaagggccgctgtgcc
acctgcgagggcgaaggctcggtgtacgtggaattgctgttcatgcccagcgtctacgca
ccgtgcccgacctgtcacggcgcacgctataacgccaagacgttggagatcgcgctacgc
ggtcgcaacatcgcgcaggtgctggagatgacggtggatcaggcagccatcttctttgcc
gacgatgccggcgtgctgcgaccgttgcaggtgttgcgcgaagtggggctgggctatctg
cgtctcggccagccggccaccgaactgtccggcggtgaagcgcagcgcatcaagctggcg
accgagctgcaacgcgcgcagcgacgcgacaccgtctacgtgctggacgaaccgaccacc
ggcctgcatccgtccgacgtggataccttgatggcccagttgcaagggctggtcgacgca
ggcaatacggtgatcgtggtcgaacacgatatgcgcgtggccgccagcagcgactgggtg
ctggacatggggccgggcgcaggcggcgtcggcggtcacgtggtggtggcaggaccaccg
gatgtcgtggcacgccatcgtggcagccgcaccgcaccgttcctggcgcaggtgttgcgc
ggggaataa
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