KEGG   Xanthomonas citri pv. citri NT17: J169_01480
Entry
J169_01480        CDS       T03734                                 
Name
(GenBank) DEXH box helicase, DNA ligase-associated
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xcn  Xanthomonas citri pv. citri NT17
Brite
KEGG Orthology (KO) [BR:xcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcn03400]
    J169_01480
Enzymes [BR:xcn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J169_01480
    5.6.2.6  RNA 3'-5' helicase
     J169_01480
DNA repair and recombination proteins [BR:xcn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J169_01480
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AJY90309
UniProt: A0A0U5FB74
LinkDB
Position
complement(1544959..1547460)
AA seq 833 aa
MSATQQVHGTPLQQWRAWFAQRGWAPLPFQREVWKRYLDGKSGLLHTPTGSGKTLAAFGG
PLLEALAARGRNSPRKSGKPASPARRQPQRNLQVLWITPLRALAADTARALRKPVDDLGL
DWQVGLRTGDASARDKRLARSGKLDVLVTTPESLALLLSYADTAPQLSALRCVIVDEWHE
LLGNKRGVLLQLCLARLRGWTPQLRIWGLSATLGNLPQARDVLLPHRPEAALVSGVKPRT
MTLETLLPQSGERFPWAGHLGLAQLARVLQKIMQQRTSLVFTNTRAQAELWHQALSAVWP
EDLATLALHHGSLDPALRAAAERGLADGSLRCVVATSSLDLGVDFPAVDQVLQVGSPKGI
ARLLQRAGRARHRPGESGHVVCVPSHALELVEYAAARRALVHSHIEARPPPRLSLDVLAQ
HCVTLALGGGFHADALFEEVRGTDAFAALEKTTWNAVLDFIVQGGSALAHYPDFHKVMRD
DDGLYRVIDRRVALRHRLSIGTITSDGSVRVQFLRGGRLGAVEEQFIGRLRRGDRFQFAG
RLLELVRLEDMTAYVRVAKGGSGVVPKWMGGRMPLSSALGREVEAVFADPGDAPEMQALA
PLLHLQASLSSLPGPDHLLVESVKARDGRHVFVYPFAGRQVNEGLAALLAARWGRRHRNT
FSFAANDYGFVLSPAQDVDIDADALQTLLSPAGLFDDLRDSLNLGELARRQFREIARVAG
LLSPSLPGRAPRSLRQLQASSGLLYDVLQRFDPDHLLLAQAEREVFEGQLELARLAHALE
DCARRELRLRKPRSLTPLSFPLWAERVRGQLSTEDWKARVLRAAEQLERKHGR
NT seq 2502 nt   +upstreamnt  +downstreamnt
gtgagcgccacacagcaagtgcacggcacaccgttgcaacagtggcgtgcctggttcgcg
cagcgcggctgggcgccgctgccgtttcaacgcgaggtgtggaagcgctatctggacggc
aaatcgggcctgctgcacacgcctaccggcagcggcaagacgctggcggcatttggcggg
ccgttactggaggcattggccgcgcgtgggcgcaattccccgcgcaaatcgggcaaaccc
gcctcgcctgcgcgccgccagccgcaacgcaatctgcaagtgctgtggatcacgccgttg
cgcgcactggccgccgacactgcacgcgcgctgcgcaagccggtcgacgacttggggctg
gactggcaggtcggcctgcgtaccggcgatgccagcgcgcgcgacaagcggctggcacgc
agcggcaagctcgacgtgctggtcaccacgcccgaatcgctggcgttgctgttgtcgtat
gcggataccgcgccacaactgtcggcgctgcgctgcgtcatcgtcgacgagtggcacgag
ctgctgggcaacaagcgcggcgtattgctgcaattgtgtcttgcgcgcttgcgcggatgg
acgccgcaactgcgcatctgggggctatcggcaacgctgggtaatttgccgcaggcacgc
gatgtgctgttgccacatcgccccgaggcggcgctggtctccggcgtcaaaccgcgcacc
atgacgctggaaaccctgctgccgcaaagtggcgagcggtttccgtgggcgggccatctt
ggcctggcgcaactggcgcgcgtgctgcagaagatcatgcagcagcgcaccagcctggtg
tttaccaacacgcgtgcgcaggccgagctatggcatcaagccttgagtgcggtgtggccg
gaggatctggccacactggcgctgcatcacggctcgctggatccagcgttacgcgcggcc
gccgaacgcgggctggccgacggcagcctgcgctgcgtggtggccacctccagcctggat
ctgggcgtcgacttcccggccgtggatcaggtgctgcaggtcggcagcccgaaaggcatc
gcacgcctgctgcaacgcgccgggcgcgcacgccatcgtcccggcgaatcaggccacgtg
gtgtgcgtaccctcgcatgcgctggagctggtcgaatatgcggcggcacggcgcgcgctg
gtgcacagccatatcgaagcgcgtccaccgccacggttatcgctggacgtgctggcgcag
cactgtgtcaccctcgccctcggcggcggcttccacgccgatgcgttgttcgaggaagtg
cgcggcaccgatgccttcgccgcgctggaaaaaaccacgtggaacgcggtgctggatttc
atcgtgcaaggcggcagcgcgctggcgcattacccggacttccacaaggtgatgcgcgac
gacgacggtctgtaccgcgtgatcgaccgacgcgtcgcgctgcggcatcggctgtccatc
ggcacgatcaccagcgacggcagcgtgcgcgtgcagtttctgcgcggcgggcggctgggc
gcggtggaagaacaattcatcggccgtctgcgccgcggcgaccgcttccagttcgccggc
cgcctgctggaactggtgcgcctggaagacatgaccgcctacgtgcgcgtggcaaagggc
ggcagtggcgtggtgccgaaatggatgggcgggcgcatgccgttatcgtcggcgctggga
cgcgaggtggaagcggtgttcgccgatcccggcgatgcgccggagatgcaggccctggcg
ccgttgctgcacctgcaagcgtcgctttcttcgctgcctgggccggaccatctgctggtg
gaaagcgtcaaggcgcgcgacggccgccacgtcttcgtctacccgttcgccggcaggcag
gtcaacgaaggcctggccgcgttgctcgcggcacgctggggccggcgccaccgcaatacc
ttcagcttcgctgccaacgactatggctttgtgctgtcgccagcgcaggatgtcgacatc
gatgccgatgcgctgcagaccctgctgtcacctgcgggcctgttcgacgatctgcgcgac
agcctcaatctgggcgaactggcacgccggcagttccgcgaaatcgcacgcgtggccgga
ttgttgtcgccctcgttgcctggccgggcgccgcgcagcctgcgccagctgcaggcctcc
agcggcctgctgtacgacgtattgcaacgcttcgaccccgatcacctgctgctcgcccag
gccgaacgcgaagtgttcgaaggccagctcgaactggcgcggcttgcgcatgccctggaa
gattgcgcgcgacgtgagctacgcctgcgcaagccgcgcagcctcacgcccttatcgttt
ccgctctgggccgaacgcgtgcgtgggcaactgagtaccgaagactggaaggcccgcgta
ttgcgcgctgccgaacaactggaacgcaagcatgggcgatag

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