Xanthomonas citri pv. citri NT17: J169_01548
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Entry
J169_01548 CDS
T03734
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xcn
Xanthomonas citri pv. citri NT17
Pathway
xcn03030
DNA replication
xcn03430
Mismatch repair
xcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J169_01548
03430 Mismatch repair
J169_01548
03440 Homologous recombination
J169_01548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcn03032
]
J169_01548
03400 DNA repair and recombination proteins [BR:
xcn03400
]
J169_01548
Enzymes [BR:
xcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J169_01548
DNA replication proteins [BR:
xcn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J169_01548
DNA repair and recombination proteins [BR:
xcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J169_01548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJY90377
UniProt:
A0A0U5BS28
LinkDB
All DBs
Position
complement(1617941..1621531)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDMPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAIHPEWLQAGHANLFALAGRDSLAGRLFNEGRADLAEQQLADWQRVFGDGLHL
ELTRTGRDGEERFNQFALHAAGVRGLPVVASNDVRFLYASDFNAHEARVCISSGRVLDDP
KRPRDYSDQQYMKSSEEMAALFADIPDAIDNTHALAQRCNIEMRLGTYFLPAYPVPEDET
LDTWIRSQSRQGLAARLEKNPIAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFSYGLVDSVAKLIPNILGIT
LKDAMGEGKDSEMASPDLIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPDPLS
EFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIDPVDITAIPLDDVPTYKGVFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEVILKDTYGIMVYQEQVMQMAQIVGDYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVSAAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEA
ASPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTAKLNRRTLEAMINA
GAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMRLDLPESKEWP
LGQLLTGERETLGFYLSGHPFDPHRDEVRELVGCDLGALEKILASQQRGGGGGGGDGEKR
AWRPEVGAILAGQVVGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRDRILIV
KGGLREDEFNGGYSLRIRQCWDYEQICADHAQRLSLRLDLREKQAFKRIDALLAKHRPGK
TPLRLDLLLRAPSGGVAGMLDLNGNHSVRIDQQLMDSLRADPAVRTVKIKYSPPWA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgtccatctgcacgtccacaccgagttctcgctggcggattcc
accatccgtgtgcccgagaaaccggatcaggctgacccgaaaaaagccaagcaggccaac
ctgctgagccgggcagtcgaactcgacatgcccgcgctggcagtcaccgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgaaggcgtcgggatcaagccgatcgcc
ggcgccgacgtgatgatcgccacgccggacatgacgccgtggcgcatgaccctgctgtgc
cgcgaccgtgaaggctacctgagcctgtcgcggctgctcacccgcgcctggatggaaggc
caccgccccgaaggcggcgtggcgatccatccggaatggctgcaggccgggcacgccaac
ctgtttgcgctggccggccgcgacagcctggccgggcgcctgttcaacgagggccgcgcg
gatctggccgagcaacagctggccgactggcagcgcgtgttcggcgatggcctgcacctg
gagctcacccgtaccggccgcgatggcgaggaacgcttcaaccagttcgcgctgcacgcc
gcgggcgtgcgcgggctgccggtggtggcgagcaacgacgtgcgttttctgtacgccagc
gacttcaatgcgcacgaagcgcgcgtctgcatttcctccggccgcgtgctggacgatccc
aagcgcccgcgcgactacagcgaccagcaatacatgaagtccagcgaggagatggcggcg
ctgttcgccgacatccccgacgccatcgacaacacccacgcgctggcgcagcgctgcaac
atcgagatgcgcctgggcacctacttcctgcccgcctacccggtgccggaagacgaaacg
ctggacacctggatccgcagccagtcgcgacagggtctggccgcacgcctggaaaagaac
ccgatcgcgccgggcaagacccgccaggactatgtggaccggctcgaattcgagctggac
accatcatcaagatgggctttcccggctacttcctgatcgtggccgacttcatccagtgg
ggcaaaaaccagggcattccgatcggcccgggccgcggttccggtgccggctcgctggtg
gcctgggcgctgcagatcaccgacctggacccactgccgtacaacctgctgttcgagcgc
ttcctgaatccagagcgcgtgtcgatgcccgacttcgatatcgacttctgcatggaccgg
cgcgacgaagtcatcgactacgtggcgcgcaagtacggccgcgaacgcgtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgatgccggccgcgtgctgggc
ttttcgtatgggttggtcgacagcgtggccaagctgatccccaacatcctgggcatcacg
ctcaaggacgcgatgggcgaaggcaaggactcggagatggcctcgccggatctgatccag
cgctaccaggtcgaagacgacgtgcgcgacctgatggatctggcgcgccagctcgaagac
ctcacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgcccgatccgctttcc
gagttctgcccgctgttcgccgaacacgacgaagacggccgcggcaagaacccggtgacc
cagttcgacaaggacgacgtcgaggcggtgggcctggtgaagttcgacttcctcggcctg
cgcacgctgaccatcatcgattgggcggtcaaggcgatcaacgtgcgccatgcgcgcgcc
ggcatcgacccggtcgacatcaccgccattccgctcgacgacgtgcccacctacaagggc
gtgttcgcctcgggcaataccggtgcggtgttccagttcgaatcctcgggcatgcgccgc
ctgctcaaggacgcgcgcccggaccgcttcgaagacctgatcgcgctggtgtcgctgtac
cgtcctggcccgatggacctgatcccggacttcaacgcgcgcaagcacggccagcaggag
atcgtctaccccgatccgcgcaccgaagtcatcctgaaagacacctacggcatcatggtg
tatcaggagcaggtgatgcagatggcgcagatcgtcggcgattattcgctgggcggcgcc
gacctgctgcgtcgcgcgatgggcaagaaggtgccggccgaaatggccaagcaccgcgaa
atcttccgcgaaggtgcggccaagggcggcgtgagcgcagccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcg
ctggtcagctaccagaccgcgtggctgaaacggcattacccggccgaattcatggccgcc
acgctgtcctcggacatggacaacaccgacaaggtggtgggctttctggatgaggtgcgc
aacctcggcctcaccgtcaaaccgccgcgcgtcaacgagtcggcgtacatgttcgaggcc
gccagcccggacaccatccaatacggcctgggcgcgatcaagggcgtcggccagggcgcc
tgcgaggcaatcgtcgaagaacgccagcgcggcggtccctacaccacgctgctggatttc
tgcacgcgcgtgggcaccgcaaagctcaaccggcgcacgctggaagcgatgatcaatgcc
ggcgccatggatggcctgggcaagaaccgtgcctcgctgatgctgcagttgccggaggtg
atgaaggccaccgagcagatggcgcgtgagcgcgcctccgggcagaactcgctgttcggc
gggccggacccgagcgcaccggcaatgcgcctggacctgcccgaaagcaaggaatggccg
ttgggccagctgctcaccggcgagcgcgaaacgctgggcttctacctcagcggccacccg
ttcgacccgcaccgcgacgaagtccgcgagctggtcggctgcgacctgggtgcgctggaa
aagatcctggcctcgcaacagcgtggtggcggtgggggcggcggcgatggcgaaaaacgc
gcctggcgcccggaggtcggcgccattcttgccggccaggtcgtcggcgtgcgccgcaag
ggcgacagccaggtgttcgtgcagctcgaagacggccgcggccgggtcgaatgcagcgcg
ttctccgacgcgatggccgagttcggccacctgctcacccgcgaccgcatcctgatcgtc
aagggcggcctgcgcgaggacgaattcaacggcggctacagcctgcgcatccgccagtgc
tgggactacgagcagatctgcgccgaccacgcgcagcggctgtcgctgcgcctggacctg
cgcgagaagcaggccttcaagcgcatcgacgccctgctggccaagcaccgccccggcaag
acgcccctgcgcctggacctgctgctgcgcgcgcccagcggcggtgtggccggcatgctc
gacctcaacggcaaccactcggtgcggatcgaccagcagctgatggacagcctgcgcgca
gaccctgcggtgcggacggtgaagatcaagtacagccctccgtgggcgtga
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