Xanthomonas citri pv. citri NT17: J169_04519
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Entry
J169_04519 CDS
T03734
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xcn
Xanthomonas citri pv. citri NT17
Pathway
xcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J169_04519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcn03400
]
J169_04519
Enzymes [BR:
xcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J169_04519
DNA repair and recombination proteins [BR:
xcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J169_04519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Nod_GRP
Motif
Other DBs
NCBI-ProteinID:
AJY93292
UniProt:
A0A0U4YGJ8
LinkDB
All DBs
Position
complement(5129898..5133302)
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AA seq
1134 aa
AA seq
DB search
MHATSAPDFRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRWLQSTLAA
EHGVAANLEFLTPGEFVARALERNLGAADDDLDMATTQWRLYAALQSDLGSDAALAPLAG
YLSDGDALKPWALAGELGSVFEKYQAWRRDWLLRWEAGADPDDPQARLWRSIAAGRQYRA
RRIGQYLDRYTRADGPLPQGLPPRVFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQG
YWGDLQTLRQRRREDGAVQLFAEQVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEIAAY
ADPLDSGRRTLADGGLGDSLLRRMQSDLFHRRGPAADARLPAVNLHDPSLQVHACHTRLR
ELQVLHDQLRALLDDARFDPPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALAD
ASPLASEPLAEVFLALLGLPIARFGLHEILDLLASAPIAEAAGLDEAGLERLRNWLHAAG
ARWGLDAAHRRQHQAPGDDAYTWRFALDRLLLGHASGADEDIDGVAPWPQLEGSALAALD
TLLRLLRVLERHQAALADAMTPVEWRERLLGLLEALIPATPTAPRAQRALDRLRTLIDQF
ARDAVRAEYAGKVPAEVVRAHFAAVLGDSDTRAPLLTGGISFGRMVPMRLLPFRVICLLG
MNDGDFPRRDPAAGLNRLTAELGTERRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGA
DARDGSVREPSVLVSELLASAAQYHAASNALDTLVVRHPLQPFAAAAFGALGDDGADPRR
FSYRRQWRPAVDSLVGQRQPLAPWVAGALPAEAIALPASMSIDALRRLLTDPAGQFLRHR
LGMRLPDPAGEDSDLEPLLAPTRGLDHYGLQQQVFEAALAGDTEGLYERLRARALLPSGP
LGRRQLDERVAQLRPYADAFRQWRGESPAQSRRLQVQIGEIELHGRVPGWYASGVGRVQV
GALSGRSAIRHGLEWLLLRAAGEHAPYVRFFEHDDGLGPHPIDAQPLSQTQAHTALAELL
QLYRQGVQTPLAFAPYSSWKYHQAARGGDLDKAIKEAAGQWQSGFGWSESHSPELRLVTR
GRDPFADAQRFAAFATTSHRVYALLEQGNTGAPLETERVIDSWRHWHGAREDAE
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccacttccgcgcccgatttccgtctttatccatccaatgcgctggataccctg
gctgccttgctcgcgcaggagttgcgccggccgatgcccgggcagccgttgctgcagccg
gaggtggtgctgattccacaggtggcgatgcggcgctggttgcagtccacgcttgcggcc
gagcacggtgttgcggcgaatctggaatttctcacgcccggcgaattcgtcgcgcgcgcg
ctggagcgcaacctcggcgcggccgacgacgacctggacatggcgaccacgcagtggcga
ttgtatgcggccctgcaatcggacctgggcagcgatgcggcgttggcgccactggccggc
tatctgtccgatggcgatgcgctcaagccgtgggcgctggccggcgagctgggcagcgtg
ttcgaaaaataccaggcatggcgccgcgactggctgctgcgctgggaagcgggcgccgat
ccggacgacccgcaggcacggttgtggcgcagcatcgccgccggccggcaataccgtgca
cggcgcatcggccagtatctggaccgctacacgcgtgccgatggtccgttgccgcaaggc
ctgccgccgcgcgtgttcgccttcgccatcttgaacatctcgccggacgtcttgcgcgtg
ctggccacgcaggcgcgcgtgggtacgctgcacttctatctgcccaccccgacgcagggc
tactggggcgacctgcagaccttgcggcaacgccggcgcgaagacggcgccgtgcaactg
ttcgccgagcaggtgcaggaaaacccgttgctgcaggcctggggcgcagccgggcgcgac
ttcatggcgctggtgggcgactacgaagtggtgcacccgctggcggaaattgccgcctac
gccgacccgttggactccggccgccgcacgctggccgatggcgggctgggcgacagcctg
ttgcggcgcatgcagagcgatctgttccatcgccgcgggcctgcagctgacgcgcgattg
ccggcggtgaatctgcacgaccccagcctgcaggtgcacgcctgccacacgcggctgcgc
gagttgcaggtattgcacgaccaactgcgtgcgctgctcgacgatgcacgcttcgacccg
cccctgcagccgcgcgagatcgcggtgctgtcgcccaacatcgacccgtacgtgccgtat
ctggatgcggtgttcggcagccacggcaacgacgacgcgctgccctacgcgctggccgat
gccagcccgttggcgagcgaaccgctggccgaagtgttcctcgccttgctcggtttgccg
atcgcgcgtttcgggctgcatgaaatcctcgacctgctggccagcgcgccaatcgccgaa
gcggccggcctggacgaagccgggctggaacgcctgcgcaattggctgcacgcggccggc
gcgcgctggggcctggatgcggcgcaccggcgccagcaccaggcaccgggcgacgatgcc
tacacctggcgtttcgcgctggaccggctgctgctcggccatgccagcggcgccgacgag
gacatcgatggggtagcgccgtggccgcagctggaaggcagcgcactggccgcactggac
accttgttgcggctgttgcgcgtgctcgaacggcatcaagccgcgctggccgacgcgatg
acaccggtcgagtggcgcgagcgtttgctgggtctgctcgaggcattgatcccggccacg
ccgactgcgccgcgcgcgcaacgcgcgctggatcgcttgcgcaccttgatcgaccagttt
gcccgcgatgcggtgcgcgccgagtacgccggcaaggtgccggccgaggtggtgcgtgcg
catttcgccgcggtgctgggcgactcggatacgcgtgcgccgctgctcaccggcggcatc
agtttcgggcgcatggtgccgatgcgcttgctgccgttccgcgtgatctgcctgctcggc
atgaacgatggcgacttcccgcgccgcgacccggccgccgggctcaatcgcctcaccgcg
gaactgggcaccgagcgtcgccggcacggcgaccgttccacgcgcgaggacgaccgcttc
ctgttcctgcagttgttcgcctccgcgcaagaggtgttttacctcagctatctcggtgcc
gatgcgcgcgatggcagcgtgcgcgagccgtcggtgctggtcagcgaattgctggcgagc
gctgcgcagtaccacgccgccagcaacgcgctcgacacgctggtggtgcggcacccgttg
cagccattcgccgccgccgcgttcggtgcgctgggcgacgacggcgccgatccgcgccgt
ttcagttatcgccggcaatggcggccggcggtggacagcctggtcggccagcggcagccg
ctggcgccgtgggtggccggtgcattgccggccgaagcgatcgccttgccggccagcatg
tccatcgacgcgctgcgccgcttgctgaccgaccctgccgggcagtttctgcgtcatcgg
ttgggcatgcgcctgcccgatccggccggcgaagacagcgatctggaaccgttgctcgcc
cccacgcgcgggctggatcactacggcttgcagcagcaggtattcgaagctgcattggcc
ggcgacaccgaaggcctatacgagcgcctgcgcgcgcgcgcgctgctgccgtccggcccg
ctggggcggcgccagctcgacgagcgcgtggcccaattgcgcccgtatgccgacgcattc
cggcagtggcgtggcgagtccccggcccagtcgcgccggctgcaggtgcagattggcgag
atcgaactgcacggccgtgtgccgggctggtacgcaagcggcgtggggcgcgtgcaggtc
ggcgcgctcagcgggcgcagcgccattcgccacggcttggagtggttgctgctgcgcgcc
gccggcgaacacgcgccgtacgtgcgtttcttcgaacacgacgacggcctgggcccgcat
cccatcgatgcacaaccgctgtcgcaaacgcaggcgcataccgcattggccgagctgctg
cagctgtatcgccagggcgtgcagacaccgctggccttcgcgccgtacagcagctggaaa
tatcaccaggccgcgcgcggcggcgacctggacaaggccatcaaggaggcggccgggcag
tggcaatcgggctttggctggagcgaatcgcatagcccggaactgcgcctggtcacccgc
ggccgcgacccgtttgccgacgcgcaacgcttcgccgcgttcgccaccaccagccatcgt
gtgtacgcattgctcgaacaggggaacaccggcgcgccactcgagaccgagcgggtgatc
gacagctggcgacactggcacggcgcgcgcgaggatgccgaatga
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