KEGG   Xiphophorus couchianus (Monterrey platyfish): 114133199
Entry
114133199         CDS       T05908                                 
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xco04131]
    114133199 (copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114133199 (copb2)
Membrane trafficking [BR:xco04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    114133199 (copb2)
Exosome [BR:xco04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   114133199 (copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th PEP5_VPS11_N WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_LRRK2 WD_LRWD1 DUF7688 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 114133199
NCBI-ProteinID: XP_027854713
LinkDB
Position
18:complement(8642705..8653180)
AA seq 1190 aa
MPLRLDIQRRLTARSERVKSADLHPTEPWMVLSLYTGTVVVWNHETQAIVKSFELCGLPV
RVAKFVARKHWIITGADDMQIRVFNYNTLDRVFMFEAHCDYIRCVAVHPTQPFVLTSSDD
MLIKLWDWDRKWTCCQVFEGHAHYVMQVVFNPKDNNQFASASLDRTIKVWQLGSKSPNFT
LEGHEKGVNCIDYYNGGDKPYLISGADDNLVKIWDYQNKTCVQTLESHVQNVTCVCFHPE
LPVILTGSEDGTVRVWHSNTYRLENTLNYGMERVWCICGQSGSNNIALGYDEGSIIIKLG
REEPAMSMDSSGKIMWARHSEVQQANLKTLGESEIQDGEKLPLGAKDIGSCEIYPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYATREGISVVKIFKNFKE
KKTFNPDFGADGIFGGFLLGVRSTSGLAFYDWESSSLIRRVEILPKHMFWSDSGELVCIA
TEESFFVLRYLTERVSAAQESKETLTEDGIEDAFEVLGEVQEVVKTGLWVGDCFIYTSSM
NRLNYYVGGEIITIAHLDRTMYLLGYIPKDDRLYLGDKELNIISYSLLLSVLEYETAVMR
KDFTTADRVLPTIPMEQRTRVAHFLEKQGFRQQALAVSTDLDHKFELALQLGELRMAHEL
ALEAESEHKWKQLAEVASTKGQFSLAQECLHQAQDYGGLLLLATASGSADMVGKLAEGAE
KDGKTNVAFLTYFMQGRTDKCLELLIKTDRLPEAAFLARTYMPSQVSRVVKLWKENMSKV
NQKAADALADPDQYSNLFPGLQQTLLAEQYLKETHVGVRPAAEYPLIMSNKDRDVLEESK
GFITKGKITEPGEAEGSMNESPAVASEATVMEEPIPIKHEPPADPVPVTEKIFSFPEEAP
LSVFATKDHVEPKQAQFECRVKGENIMKSETLLIAEERLIQKPCTEVPAKDSEAVQSSPV
EGVRLSNEVADQGVASAAEAQPAITVSEEEETQTADDVLISTDLKANSVIASESAALEET
SRPDQQETDTIPLVAIATEETPIAKLPVAVEELVSLEPTERSLLDVLSGTGQAISDLILD
SSLDSDEDASAALKPVTVWEDEQEQEEKTAEPPAETEDGWEVGSLPEAEPEGSHDTAEAN
VAEQEAGSEASQDLSEELEETINHEDLDDLDLDSFELEDIDTLDVNLLDE
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgcctctgaggttggacatccagcggaggctgacagctcgttcagaaagagtgaagagc
gcggacctgcaccccactgagccgtggatggtgctcagcctctacaccggcaccgttgtg
gtctggaaccatgaaacacaggcaattgttaaatcctttgagctgtgcggtctgcctgtt
agagtggccaagtttgtagccaggaaacactggatcattactggagcagatgacatgcag
atccgtgtgttcaactacaacacgctagacagggtcttcatgtttgaagcccactgtgac
tacatccgctgcgtcgctgtgcaccccacgcagccctttgtcctcaccagcagcgatgac
atgctgatcaaactgtgggactgggacagaaagtggacgtgctgtcaagtgtttgaggga
catgcacactatgtcatgcaggtcgtcttcaaccctaaagacaacaaccagtttgccagt
gcctctctagacagaaccattaaggtgtggcagttgggctccaagtctcccaatttcact
cttgaaggtcacgagaaaggagtgaactgcattgattactataatggaggagacaagccc
taccttatatcaggagcagatgataatcttgtgaagatctgggattatcagaacaaaacg
tgtgttcagaccctggagagtcatgtgcagaatgtgacctgtgtctgcttccaccctgaa
ctgcctgtcattctcacaggatctgaggatggcactgtcagagtttggcactctaacacc
tacagacttgaaaacacacttaattacgggatggaacgagtgtggtgtatatgtgggcag
tctggctccaacaatatagctctgggctatgatgaaggcagcatcatcattaagctgggt
cgggaggagccggccatgtccatggactccagtgggaaaatcatgtgggcccgtcactct
gaggtgcagcaggccaacctgaagacgctgggagagtcggagattcaggacggagagaag
ctcccacttggtgccaaagacataggcagctgtgagatttacccacaaaccattcaacac
agccccaatggcagatttgtagtggtgtgtggagatggggaatatatcatctacactgcg
atggccttgaggaacaaaagctttggctctgctcaggagtttgtctgggcacacgactcc
tcacagtatgccacgagggagggcattagcgtggtgaaaatatttaaaaactttaaagag
aagaagactttcaaccctgattttggggctgatggcatctttggtggcttcttactggga
gtgaggtcaaccagcggactggctttctatgactgggaaagctccagtttgatccgccgt
gttgagatcctgcctaagcatatgttctggtctgactctggggagctggtgtgtattgct
acagaagagtccttctttgtgttgcgctacctgacagagcgagtgtcagcagcacaggag
tctaaagaaacgctgacagaggatgggatagaagatgcttttgaggtactgggtgaggtc
caggaggttgtaaagacaggtctgtgggtcggagactgcttcatctataccagctccatg
aacagactcaactactatgttggaggagagatcataactattgctcacctggacaggacc
atgtatctgctgggctacatcccaaaagacgaccgactctatctaggagacaaggagctc
aacatcatcagttactccctgctgctgtctgttctggaatatgagacagctgtcatgagg
aaagatttcaccacggctgacagggtccttcccacaataccaatggagcagaggaccagg
gtcgcccacttcctggagaaacagggtttcagacagcaggcgctggctgtgtccactgac
ctggatcacaagtttgagcttgctctgcagctgggggagctgaggatggcgcatgaactg
gcactagaggcagagtctgagcataaatggaagcagttggccgaagtcgcctctacaaag
gggcagttcagcctggctcaggaatgtctgcaccaagctcaggattacggtggattactt
ctgctggcaaccgcctcaggcagcgcagacatggtagggaaactggctgagggagcggag
aaggatgggaagaccaatgtggctttcctcacctacttcatgcaaggaagaactgacaaa
tgtttggagctgcttattaaaactgatcgattgccagaggctgctttcctggcaagaaca
tacatgcccagccaagtctcaagggtggtgaagctgtggaaggagaacatgtccaaggtt
aaccagaaggcagcagatgcactggctgacccagatcagtacagcaacctgttccctggc
ctccagcaaactctgctggctgagcagtacctgaaggagactcatgttggggtcagacct
gctgcagaataccccctcatcatgtcaaacaaggaccgtgatgttctggaggagtccaaa
ggttttatcaccaaaggaaagattactgagccaggggaggcagagggaagcatgaatgaa
agccctgctgttgcttcagaagcaacggtaatggaagaacccattccaataaaacatgag
cctcctgctgatcctgttccagtgacagagaaaatatttagttttccagaggaagctcct
ctgtctgtctttgccactaaagaccatgttgagccaaagcaagcacagtttgagtgtcga
gttaaaggggaaaacattatgaaatcagagactttacttattgcagaggaacgcttgatc
cagaaaccatgcactgaggttcctgccaaagactcggaggccgtacagtccagtccagtg
gaaggtgtacgtttatctaatgaggtggctgatcagggcgtagcttcagcagctgaagct
cagccagctatcacggtatctgaagaggaagaaacacaaacagcagatgatgtgctaatt
agcacagatctaaaagccaattctgtaattgcatcagaatctgcagcattagaggaaaca
tccaggcctgatcaacaggaaacagacaccattcccttggttgctatagcaacagaagaa
actccaattgcgaagctacctgtagcagtagaggagctcgtctctttagaaccaacagaa
cgttccctgctggatgttctgtcaggcacaggccaggctatttcagatctgatcctcgat
tcatcgctagactcagatgaagatgcatcagcggcgttgaagcctgtcactgtgtgggag
gatgagcaagaacaagaggagaaaactgcagaacctccagcagagacggaggatgggtgg
gaagtgggcagtcttcctgaggctgaaccagaaggatcacacgacacagcagaggcgaac
gtggcagagcaggaagcaggctctgaggcatcacaggacctatcagaagaactcgaggaa
acaatcaaccatgaggaccttgatgatctggatctggacagttttgaactggaggacatc
gacacattagacgtgaatctgctggatgaatag

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