Xiphophorus couchianus (Monterrey platyfish): 114133223
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Entry
114133223 CDS
T05908
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
xco03110
]
114133223 (clpb)
Chaperones and folding catalysts [BR:
xco03110
]
Heat shock proteins
HSP100
114133223 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
ClpB_D2-small
AAA_5
AAA
Ank_5
Ank_4
Zeta_toxin
Sigma54_activat
AAA_22
Torsin
bpMoxR
AAA_24
AAA_16
AAA_3
nSTAND3
YchF-GTPase_C
NACHT
ATPase_2
ABC_tran
RuvB_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
114133223
NCBI-ProteinID:
XP_027854747
LinkDB
All DBs
Position
18:17338628..17374701
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AA seq
678 aa
AA seq
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MLSSVPTRLLTRRSRSLSPCGRVLQTSASGATGPCFRETQAETNRNPIVSTSRVSRRGIL
SEETAVTSVSPSVQYHHLAPRWLSNLENRRSSWAALASRGRQNNQYWEDSRQSGGNENRG
TGAGASRAGLASAGVLSAAAVAFCLRKDSGNKDDSLLEAARTNNAQDVSRLIKEGVDPNH
RHRLGWTALMVAAMNRQHSAVKALLEAGADPNAGDDFNNVYDTSREKGIHSLEVLVSRED
EFSSRLSSRAGFRGCTALHYATLADDPHAVRMLLEAGANPLQTNSLGHTARAYAKEGEVN
TVLQEWEGKFKELQARREAEERRRFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDEE
HPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYIG
HEEGGQLTKLLKACPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFI
MTSNVASEDIAQHALQLRQEAEELSRRKLADKLEDVEKSDDIKISRQFKDTVIRPILKAH
FRRDEFLGRINEIVYFLPFCYSELLQLVSKELNFWAKKAKQRHDITLQWDHPVLDLLAGG
YNLHYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLFVQSEGQEEHSMPRLRLEVVG
EDSSSRTLDIRPPLNPEH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatccgttcccaccaggctgctgacgcgaaggtcgcgcagcctgtcaccgtgc
ggtcgcgtgcttcagaccagcgccagtggagccacgggtccatgtttccgcgaaacacag
gcggagaccaaccggaaccctatcgtatccacgtcccgtgtatccaggagggggattttg
tctgaagagactgctgttaccagcgtgagcccatcggtgcagtaccaccacctcgcccca
agatggctgtcaaacctggagaaccgccgtagctcctgggcggctctggccagtagaggg
cgacaaaataaccagtattgggaggacagcaggcagagcggtgggaatgagaaccgtggt
actggtgcgggtgccagccgagcagggttggcctcagctggtgtgctgtcagccgcagca
gtggccttctgcctgaggaaagactccggtaacaaagatgattctcttcttgaggcagca
agaaccaataatgcacaggatgtgtccaggctaataaaagaaggcgtggatccaaatcat
cgtcaccggctgggatggaccgctcttatggtggctgcaatgaacagacagcacagtgcg
gtgaaagctcttcttgaagctggagccgacccgaatgccggagacgacttcaacaatgtt
tatgacacttcaagggagaaaggcatccactctctggaagtgctggtatccagagaggat
gaattcagcagcaggctcagcagcagagctggtttccgtggctgcaccgcgcttcactac
gccacactggctgacgacccacacgctgtccgcatgcttctggaggctggtgccaacccg
ctacaaaccaatagtttgggacacacggcccgggcttatgcaaaggagggagaagtcaac
acagttctgcaggagtgggagggcaagtttaaggagctgcaagcgcgtcgagaggcagag
gaaaggcggaggttccccctggagaggaggctgaaggagcacatcatcggtcaggaaggg
gccatcaataccgtggcttcagccatcagaagaaaggagaatggctggtacgatgaagag
catcctctcgtcttcctcttccttggctcgtcaggaattggaaagacggaattggcaaaa
caggttgctcgctacatgcacaaagacattaagaagggtttcatccgcatggacatgtca
gagttccaggaaaaacacgaggttgcaaagtttattggttctcctccaggatacattggg
catgaggaagggggtcagctgaccaagttgttgaaggcatgccccaacgctgttgttctg
tttgatgaagtggataaagctcatcctgacgttcttaccatcatgctgcagctgtttgat
gagggtcgtctcacagacggcaaaggaaagactattgagtgtaaggatgccatttttatc
atgacttcaaatgttgcaagtgaagacattgcccagcatgctttgcaactgcggcaggaa
gctgaggagctcagtcgtaggaagctggccgacaaacttgaggatgttgagaaaagcgac
gacattaaaatctcccggcagtttaaagacacggtgatccgaccaatcctgaaggctcat
ttccggagggacgagtttcttggtcggatcaatgaaatcgtgtacttcctgccgttttgt
tactcagagctgctgcagctggtcagcaaagagctcaacttctgggccaaaaaggctaag
cagcgtcatgacatcactcttcagtgggatcacccggtcctggacctactggcgggtgga
tataacctgcactatggagcgcgttccataaaacatgaggttgagcgacgggtcgtcaac
caattagctgcagcatacgaacaggagctgttgcccaagggttgcacgctgcgtctgttc
gtccaatcagaaggccaggaggagcacagcatgcccaggctgcgcctggaggttgtggga
gaggacagttcatcgagaacgctggacatccgtccaccgctgaatcctgaacactaa
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