KEGG   Xiphophorus couchianus (Monterrey platyfish): 114133341
Entry
114133341         CDS       T05908                                 
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    114133341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xco04121]
    114133341
   03400 DNA repair and recombination proteins [BR:xco03400]
    114133341
Ubiquitin system [BR:xco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     114133341
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     114133341
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 114133341
NCBI-ProteinID: XP_027854962
LinkDB
Position
18:complement(2010712..2026434)
AA seq 792 aa
MATPNLLKIFLHPSHMSFWQNKGSLQFEDKWDLMRPIVLKLLRQEAVTKQQWFDLFSDVH
AVCLWDDKGPAKIHQALKEDILDFIKQAQTRVLSHQDDTALLKAYIVEWRKFFTQCDILP
KPFCQLEITLMGKQGSNKKTNMEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERL
GEAFDSQLVIGVRESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQ
NYMKYADAKLREEEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRN
ETEKLHLMFSLMDKVPSGIEPMLKDLEEHIINAGLADMVAAAETITTDSEKYVEQLLTLF
NRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGMKTQPESKCPELL
ANYCDMLLRKTPLSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISA
DSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNI
KILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEV
GQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKKQVL
SYDPSVSSPKDFTDATLFYVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIV
QLRILRTQEAIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKR
DESDINTFIYMA
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggcgacgcctaatttgttaaagattttcctccacccttcccacatgtctttctggcag
aacaaggggtccctgcagtttgaggacaagtgggacctgatgcggcccatcgttctcaag
ctgctaagacaagaggctgtcaccaagcaacagtggttcgacttattctctgacgtccat
gctgtctgtttatgggacgataaaggtcctgctaaaatccaccaagccctcaaagaagac
atcctcgacttcatcaaacaagcacaaacccgcgtgctgagccaccaagacgacacggcg
ctgctgaaggcgtacatcgtggagtggaggaagttctttactcagtgcgacatcctgccc
aaaccgttctgtcagctagagatcacgctgatggggaagcagggcagcaacaagaaaaca
aacatggaggacagcatcgtacgcaagctgatgctggacacgtggaacgagtcgatattt
tccaacattaagagccgcctgcaggacagcgcgatgaagctggtgcacgcagagaggctg
ggcgaggccttcgactcgcagctcgttatcggcgtccgggaatcatacgtcaacctgtgc
tccaacccggaggacaagctgcagatctacagggataactttgagaaagcctacctggac
tccactgagaggttctacagaacacaggcaccgtcctacctgcagcaaaacggtgtccaa
aactacatgaaatatgctgatgcaaaactcagagaggaggagaagagagcgcttcgatat
ctagagacacgacgtgaatgtaattctgttcaggcacttatggagtgttgcgttaacgct
ttggtgacttcgttcaaggagaccatcctagccgaatgtccaggaatgattaaacgcaac
gagacggagaagctgcacctcatgttttcactaatggacaaggttcccagtgggattgag
cccatgctgaaggacctagaagagcacatcattaatgctggactggcggacatggtcgct
gccgctgaaacgatcactaccgattctgagaagtatgtggagcagctgctgacgttgttt
aatcgcttcagtaaactggtgaaggaggctttccaggatgacccgcgcttcctcacagca
agagataaggcttacaaagccgtcgtcaacgatgcaacaatcttcaagctggagctgcct
ctgaagcagaagggagtgggaatgaaaactcagcccgagtccaaatgtcccgagctgctg
gcgaactactgtgacatgttgctgaggaaaacgcccctcagcaagaaacttacctctgaa
gaaattgagctgaagctcaaagaagtgctcttggtgttgaagtacgtccagaacaaagac
gtcttcatgcggtaccacaaagctcacctgacgaggcgccttattctggacatttcagcc
gacagcgagattgaggagaacatggtggagtggctgagggaagtaggaatgcctgctgac
tatgtgaacaagctggccaggatgtttcaggacatcaaggtttcagaggatctcaatcag
gtcttcaaggagatgcacaaacacaacaagctggctctaccagcggacagcgtgaacatt
aaaatcctgaacgccggggcgtggtcacggagcagcgagaaggttttcgtctcgctgccg
acggagctggaggacctgatccccgaggtcgaggacttctacaagaggaaccacagcggt
cggaaactccactggcatcacctcatgtccaacggcatcatcacctttaagaacgaggtg
ggccagtacgaccttgaggtcacgaccttccagctcgccgtgctgtttgcctggaatcag
aggccgagagagaaaatcagctttgagaacctcaaactggccacggagcttcctgacgcc
gagctgcgccgaacgctttggtctctggttgcgtttcctaaactgaagaagcaagtcctg
tcgtatgacccgtccgttagctcacccaaagactttacagatgccacgctcttctacgtc
aaccaggagttctcgctcatcaaaaactccaaagttcagaagagagggaagatcaatttg
attggtcggctgcagctcacaacggagagaatgagagaggaagagaatgaaggaatcgtt
cagctcagaatactcagaactcaggaggctatcatccaaatcatgaagatgaggaagcgc
atcagcaacgctcagctgcaaacggagctggtggaaatcctgaaaaatatgtttctgcct
cagaagaagatgataaaggagcagatcgagtggctcatcgaacacaaatatataaagagg
gacgaatcggacatcaacaccttcatctacatggcctag

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