Xiphophorus couchianus (Monterrey platyfish): 114133361
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Entry
114133361 CDS
T05908
Symbol
fbxo40
Name
(RefSeq) F-box only protein 40 isoform X1
KO
K10315
F-box protein 40
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114133361 (fbxo40)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114133361 (fbxo40)
BRITE hierarchy
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GFIT
Motif
Pfam:
zf-TRAF_2
F-box_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
114133361
NCBI-ProteinID:
XP_027854998
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Position
18:complement(5591472..5598980)
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AA seq
727 aa
AA seq
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MEKGTKMAKGIHDHCDKCYSVSCQAPVNLSISCVVIKCHKNCGATFHMCKQEEHQLLCPN
EMVPCFNVEFGCLLKMPRHKSAKHLEVCPASVVCCSQEWNRFPVPETDMTFYRNVSESLQ
PNTEANLDVALALRDQALLFQSIKMKSIFPEMMEEEPASPNISNGVSNSVEDPSCSLDCG
EFTENRRAEMEGRELSQEETDALAKNGNVASPHNYNTWEKIFKKDKEGCNQAVKCLNNGG
KEEEREEQKSLNCEVEKVGNKNSHQPEINESRNMNGATGLAPWQDGVLERLGKEVNVAEY
NMYLVHNGAMLINFGQLAACTPREKDFVYGNLEPIEVQTVRSFNVPTSYRAKRSHLKDPS
HKAKTAHQSVDTLDLDVSVENLPMSEEVSATLLCSLEKELKGHLISESIATDGLYVDIGT
QTYNFSSAPFKADATLAAVIAGRPRGLYVDVETEPVTRRHNKISSSFSYMCGCSFRRDEF
QSHFRNVHCDIQASLSGWFQQRCPLAYLGCTFSQIRFCPSGQEATIKYRQDVSTIVLQPR
FPSSFTDAEKRLSPQGSAGQDFSGLSSLPLEILQHVAGYLDSFSLSQLSQVSRLMREVCA
TLLQDRGMVFLEWKKKTYSHGGSSWKSRKKANLEVQLSVFSGGPLELQQCSFHVRAPEKL
LLLSERGAQGAGGSGLPARGQRKTPRTEAQKIILTSWNAVGGPQQEQCHVRNHWRNWLMH
VFCTAAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggaacaaaaatggcaaaaggcatccatgatcactgtgacaagtgttacagt
gtcagctgtcaagccccggtgaatctttccatctcatgtgtggtcattaagtgtcacaaa
aactgtggcgccacctttcatatgtgtaagcaagaagagcaccagcttctctgtccaaac
gagatggtgccttgcttcaatgttgagtttggctgtctgctcaaaatgcctcgccacaag
tcagccaaacacctggaggtctgcccagctagtgttgtctgctgctctcaggagtggaac
cgctttcctgttcctgaaacagacatgaccttttacagaaacgtttctgaaagtcttcaa
ccgaacactgaggcaaaccttgacgttgctctggcactccgggatcaagccctgctgttt
cagtccattaaaatgaaaagcatttttcctgagatgatggaggaagagcctgcctctcca
aatatttccaatggcgttagcaattctgttgaggacccctcctgctccttagattgtggt
gaatttacagaaaatcgcagagcagagatggagggaagagaattgagtcaagaagagacg
gatgccttggcaaaaaatgggaatgtggcaagtccccataattacaatacatgggagaaa
atatttaagaaggataaagaagggtgcaaccaagctgttaagtgcttaaataatggagga
aaagaggaagaaagagaagagcaaaaatctttaaactgtgaagtagaaaaggtgggaaac
aaaaactcacatcaacctgagattaatgagtccagaaatatgaacggtgcaactggcctt
gcaccttggcaggacggtgtccttgaaaggttgggcaaagaagtcaatgttgcagaatat
aacatgtacctggtgcacaacggggcaatgctaattaactttggtcaacttgctgcatgc
actccaagagaaaaggactttgtttacggtaatctggagccaatcgaagttcagactgtc
cgctcatttaatgttcctaccagctaccgagcaaagcgcagtcatctgaaggacccatca
cacaaggccaaaactgcacaccagagtgtggatactttagatttggacgtgtcagttgaa
aatcttcccatgtctgaagaggtcagtgcaacacttctctgttccctcgaaaaagaactg
aagggacatttaatttcagagagcattgcaacagatggtctttatgtagatataggaaca
caaacgtacaacttttcttctgccccctttaaagcagatgcaactctagccgctgtcatt
gcaggaagacctcgtggcctttatgttgatgttgaaactgaacctgtcaccagaagacac
aacaaaatcagctcatctttcagctacatgtgtggctgctccttccgccgcgatgaattc
cagtctcatttcaggaatgttcactgtgacatacaggcctccctaagtggctggtttcaa
cagcgctgccccttggcatatctcggctgtactttttcccagataaggttttgcccttca
ggtcaagaagctacaatcaaataccgccaagatgtcagcaccattgtactccagccacgc
ttcccttcatccttcacagacgctgagaaacgtctgagtcctcaaggaagcgctggtcaa
gatttcagtggcctcagcagtctacctcttgagatccttcaacatgttgctggctacctt
gacagtttttctctgtctcagctatcacaagtttcccgtctaatgagagaagtttgtgcc
acactgttgcaggacagaggaatggtgtttttggagtggaagaaaaagacgtattctcat
ggtggaagttcatggaaaagtcggaaaaaagcaaatctggaggttcagctctctgttttc
tccggtggaccgctggagcttcagcaatgctccttccatgtcagagcacctgaaaagctg
ctccttctatcagagagaggagcgcagggagccggcggctctggcctgcctgcaagaggt
cagagaaaaacaccaagaactgaagcacaaaagataatccttacatcttggaacgcagtg
ggtggaccacagcaggagcaatgccatgttaggaatcactggaggaattggctgatgcat
gtgttctgcacagctgctgtgtaa
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