Xiphophorus couchianus (Monterrey platyfish): 114133382
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Entry
114133382 CDS
T05908
Symbol
ube4a
Name
(RefSeq) ubiquitin conjugation factor E4 A
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114133382 (ube4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114133382 (ube4a)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114133382 (ube4a)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
U-box type E3
114133382 (ube4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
114133382
NCBI-ProteinID:
XP_027855029
LinkDB
All DBs
Position
18:20047146..20064545
Genome browser
AA seq
1074 aa
AA seq
DB search
MTDQGNNNHNISCNPFAALFTSLADAKQFASSQNPQQQPQPSKPPSEELGGSHSELEASV
SDSVNDNDSVAEISRSFRSRQELCEQLNVNHIIQRIFLITLDNSDPSLRGGNGIPPRCVY
LEEMAADLDGQDWLDRDNIEQALFNRLLLLEPGNHLIYMTSCSAVNLSADRDAGEKCAIP
YLFASYQRAKEELTKVPEKLHSVAICCKNLTVSNARTVLLTPEIYVNQNIYEQLLDLWLE
GFKAARPEEVIEFVEEVIAGILSDQEVRTFEEVVVPVFDIFQGRIKDLDLCQPLLYDYLD
VLLYFCHNKDIAKVLMEHIQPKNAANGLQYQNSLLGMILNISCLLKTPGVVEGHGYFLNP
SRSSAQETKVQEANIHQFMGQLHEKLHQILKSLLQRSGETRHLLLTWLGGCLQANAGRAK
IWANQVPELFFQMYASDAFFLNLGAVLLKLCQPFCKPRSPKLLAFDPTYCALKDLSEEDR
RNRNVHARGLEKETCLIPLPPQQQVESARTYTLLTENLVFTQLTLHLGFHRLHEQMVKMN
QSLHRLQVTWQDAQRAGSPLSEQLLEQFERLMIVYLSTKAAATQPAMLQCCLNLQASTAA
LLVQLSMGNQGPEHVALSFPLASLHNTMLCYVPEFFAENMGDFFIFLRRFADEILETSTE
SLEQILNFITVFMGNVEKMKNPHLRAKLAEVLEAVMPHMEPLAPGAAQPIVFQRERVFCS
YAHAPQLAEALITVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWSKDSYRESIKHLANY
ASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKILQLERDRGEWESLAPDARRE
KESSLQMFGQLGRFHNIMSNETIGTLAFLTSEIKGIFVHPFLAERIISMLNYFLQHLVGP
KMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFSQTLRVL
KKINKPGDMIVAFGLLADKIKSHADRQQQEEETYADAPDEFLDPIMSTLMSDPVLLPSSN
VTVDRSTIARHLLSDQTDPFNRSPLTMDQIKPNTELKEQISQWLEQHRQDKQQQ
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagggcaacaacaatcacaacatctcctgcaaccccttcgctgccctcttc
acctcactggctgatgccaagcagtttgcatcaagccaaaacccacaacagcaaccgcaa
ccttctaaaccaccatcggaggagttgggaggaagtcactcagagttggaggcatccgtc
tctgacagcgtcaacgacaacgactccgtagcagaaatcagtcgctccttccggtcccgg
caggagctttgtgaacagctcaatgtcaaccacatcatccagagaatatttctaatcacg
cttgataacagcgatcccagtctgagaggaggcaatgggatccctcctcgatgcgtttac
ctggaagaaatggctgcagatctggacggccaggattggctggacagggacaacatagag
caggctttgtttaaccgcctgctgctcctggagccaggaaaccatctcatctacatgacc
tcctgcagtgcagtgaacctgtcggctgaccgggatgctggagagaaatgtgccatccct
tacctctttgcttcttaccagagggcaaaggaggagttgacaaaagtcccagaaaaatta
cattcagttgccatatgctgcaagaacctgacggtgtccaacgcgcgcaccgttctgctc
accccagagatttatgtcaaccagaacatctacgagcagcttcttgacctgtggcttgaa
ggtttcaaagcagcacggcccgaggaggtgattgagttcgtggaggaggtcattgctggc
atactctctgaccaagaggtgcgtacctttgaggaggtggtagttccggtctttgatatc
ttccaggggcgcatcaaagacttggacctttgccagcctctgctctacgactacctggat
gttctcctctatttttgtcacaataaggatatcgccaaggtgttgatggagcacattcag
cccaaaaacgcagctaatggtctgcagtaccagaacagcctgctggggatgattttgaac
atatcctgcttgctgaaaaccccgggggttgtagaggggcatggctacttcctgaaccct
tctcgctccagtgcccaggagacaaaggtccaggaagccaacattcaccagtttatgggt
caacttcatgaaaaactgcaccagatcttgaagagtttgctgcagcggtccggtgagact
cgccacttgctgctgacctggctgggcgggtgtctgcaggcgaacgcaggtcgtgctaag
atatgggccaaccaggtgccagagctcttcttccaaatgtacgcctccgatgcatttttc
ctcaacctgggggccgttctgctgaagctgtgtcagccgttctgcaagccccgttcaccc
aagctgctagccttcgacccgacatactgcgctctcaaagacctgagcgaagaagaccgg
cgtaatcgcaacgtccacgcaagaggtcttgagaaggagacctgcttgatccctttaccc
cctcagcagcaggtggaatctgcacgaacctacaccctgctgactgaaaacctcgtcttc
acacaactcaccctgcatcttggctttcaccgactccatgagcagatggtcaagatgaac
cagtcactccatcggctccaggtgacctggcaggacgcccaacgcgcgggcagcccgctg
tccgagcagctcctggagcagtttgagcgtctgatgatcgtgtatctgtcaaccaaagct
gccgcaacgcagcccgccatgctgcaatgttgccttaacctgcaagcttccactgctgct
ctgcttgttcagctgagcatgggaaaccaggggcccgaacatgtagcactcagctttccc
ctggcgtccctgcacaacaccatgctctgctacgtaccggagttttttgcagaaaacatg
ggagacttcttcatcttcctgcgccgctttgcagacgagatcttggagacctccacggaa
agtctggagcagatccttaacttcataactgtcttcatgggaaacgtggagaagatgaag
aatccccatttaagagcaaagcttgcagaagtgttggaagccgtgatgcctcacatggag
ccgctggctcctggtgctgctcagcccatcgttttccagagggagagagttttctgctcc
tacgcccatgcacctcagctggctgaggccctcatcactgtgtttgtcgacattgaattt
acaggtgaccctcatcagtttgaacagaaattcaactacaggagaccgatgtatccgatt
ctgaagtacatgtggagcaaagacagctatagagagagcatcaagcatttggcaaactat
gcatccgagaacctggaggccatgaacccccctctgttcctcaggttcctcaacctgctc
atgaatgatgccatcttcttattggatgaggctattcagtacttgagtaaaattaagatt
ctgcagcttgagcgtgacagaggggagtgggaaagcctggcccctgatgcccgaagagaa
aaagagtcaagcctgcagatgtttggacaactgggacgcttccacaacatcatgtccaat
gagactatcggcacactggccttccttacctcagagatcaagggcatctttgtgcaccca
tttctggctgagaggatcatctcgatgttgaactactttttgcagcacctggttggtcca
aagatgggtgcacttaaagtcaaggacttcagtgagtttgactttaagccacagcagctc
gtttctgacatctgcacaatctacctaaacctgggtgatgaggaaaatttctgtgccaca
gtcccgaaggatggacgatcgtattcaccgacacttttctcccagactctccgtgtgcta
aagaagatcaataagcctggtgacatgattgtggcgtttggactccttgcagataaaatt
aagtcccatgcagacaggcagcagcaagaagaggaaacgtatgcagatgctccagatgaa
ttcttggaccccatcatgtccaccctgatgtcggatcctgttcttcttccctcttctaat
gttactgtagatcgttccactatagcaagacatctcctcagcgaccaaaccgaccctttc
aaccgcagtcctctcaccatggaccagatcaagccgaacacggagctcaaagagcagatc
tcacagtggttggagcagcacaggcaggacaagcagcagcagtga
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