Xiphophorus couchianus (Monterrey platyfish): 114133413
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Entry
114133413 CDS
T05908
Name
(RefSeq) remodeling and spacing factor 1-like isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114133413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114133413
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
114133413
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
114133413
NCBI-ProteinID:
XP_027855096
LinkDB
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Position
18:complement(1947676..1967282)
Genome browser
AA seq
1369 aa
AA seq
DB search
MAAPAVARSSGPPLCPSFAEVCSFLERYGAALDLPELTFPQIERYLRDTTAVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNSTWAWELEQKGYQEMSMECKSSILKYLCECQF
DDNLKFKMVVNDEDPEKMRLQPIGRDQQGLMYWLQLDQEQNIRLYTEEQDDLDGSTWKCI
VRTRNDLAEALELLKAQIESSQSQDQDQNQNQAGTRSASPAERDTSTTGKSETNENDGIN
SIKLPKASEEENDNKMTNPVTEKMQVIKEEEVKQENTEPKMEEKTAAFDNRVSTITAVKA
EPRDADGPKNAVSVLIAPGAALLKLNKEDEAERAAVRSNQQAKIPLKKRDLKLAGCFQTN
HLNNASSSIIVCNPSVINSKDCRGRDGKPTNSLELQGSPASCLQQVITSRQELTNGRAPH
PPPRDGHNGVIGQVGVIGHVGVIRSPPELHRAPEENGPKSEPSGVKAGEEVSRQSVLVRK
GPPEQDAAAALPAHPIPPLTDQKSDLTEIKGESVGFSSQMTVNDQSSGQPEENRNVKEEP
GINSALNSGASGKGDSEPQKAEKLNKMIQQEQGVNGGLVSVVKLKKIGFVSEQKRVPLEE
ASSELQKEGIRLKIKIPPHRRNKLRRKEGKEEMKTREGQKEGRPLRRSARICRSSALPNC
RPSSKAAESQRKKPQKKQTPPARTRDEEEVDEEEDDEEQNSPSTKNQKHELAGKFSKRRG
KRRHGRPRWTNVRPKRHKPNEEEEEEEGGWKKRGEEEKEGSGSEEELSKSEEIPTEDACT
HCGLPNHPELILLCDSCDQGYHTACLRPPLMLIPDGEWFCPPCQHKMLCEKLEEQLQNLD
SALKKKERAERRRERLVYVGISVENIIPEGDVEEEEEEEEEEKSTKKKDTKKTKNLGRRS
TRTRKHISYRFDDFDDAIDEAIEEDIRDLCSGAETGKEIPSVVSEGVKENQRPIRTQSRT
ARNKKRRRLNDLESDSTAIESEEEFMLSNSSEEEEFAASGADDGEEDDEDAGSDGGSWDR
GARPKRGTRGTPKFKPRMPQRRGRKRRRRRSSEEEEETDVEMDSDRFSDMTDSDADRKRR
GLRRGQRQQVNYRETSESSDNSRTLAKRQPVKRRGRPRKEHFSSDYSDVSASSRDSEDDD
DDNDEEEDGRRRVDKRRRRGAEEEELRSGRTRKKRKRYEDEKDEEGGRRLKRRQLRREDE
DDDGRKRRTERDEEDPERMGRGKRREMLSQQRRKLLAQMLKKRRPSTDEDESDSDDSQSS
SGDDRPIRKRLNRIDSDDDEDERRVDTDDEDEGQKRKKSEHKSDGGAQEKGRSLSPSNGH
QTSRDAERRERHNGPTHPAEDEEEEEDEEEEEDEGQSDSLNSAQNSPRS
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtggcgagaagctccggcccgccgctttgcccgagcttcgcggag
gtatgttcgtttctggagcgctacggagcagcgttggacctccccgagctgactttcccg
cagatagagaggtatctgcgtgacacgacggcagttcctaaaccgttggtggagctccat
gtgaagctgctcagaaagctggggaggtccgtgaccacagaccgctgggaaaagtacctg
gctaaggtttgccaggagctgaacagcacatgggcctgggagttggagcagaaaggttac
caggagatgtcgatggagtgcaagtcgagcatcctcaagtatctgtgtgaatgtcagttt
gacgacaacctgaagttcaagatggtggtcaacgatgaggaccccgagaagatgcgtctg
cagcccatcggtcgggaccagcagggcctgatgtactggctccagctggaccaggagcag
aacatccggctctacacagaggagcaggacgatctggacggatccacctggaagtgcatc
gtccggacccggaacgacctggccgaggctctggagctgctgaaggctcagattgagtcc
agtcagagtcaggatcaggaccaaaaccagaaccaggctggaaccaggagcgccagccct
gcagaaagagacacgagtacaacggggaaatcagagacgaatgaaaacgatggaatcaac
agcatcaaactccccaaagcttcagaggaagaaaatgacaacaagatgaccaatccagtg
acagaaaagatgcaagtaataaaggaagaggaggtaaagcaggaaaacactgaacccaag
atggaggagaagacggctgccttcgataaccgcgtcagcaccatcaccgccgtcaaagct
gagcccagggacgcagacggacctaaaaacgccgtgtccgtcctcatcgcgcccggcgcc
gctctgttgaagctgaacaaggaagacgaagcggagagggccgccgtccggagcaaccag
caggcaaaaataccactgaagaagagggacctgaagctggccggctgcttccagaccaac
cacctgaacaacgccagcagcagcatcatcgtctgcaatccctccgtgatcaacagcaag
gactgtcgggggagagacgggaagccgaccaactcgttagaactgcaaggaagcccggcg
tcctgtctgcagcaggtcatcacctccaggcaggagctgaccaatgggagagcgcctcac
ccgcctcccagagacgggcataacggcgtcatcggtcaggttggagtcatcggtcacgtc
ggcgtcatccgcagcccacctgagctccacagagctccggaggaaaacgggccgaagtcg
gaaccaagcggcgtgaaggctggagaggaagtgagccggcagtcggttctggttaggaag
ggaccgcctgagcaagacgccgccgccgcacttcctgctcatccaatcccaccgctaacg
gaccagaaatcggatcttacagagataaaaggagaatctgttggtttctcctctcagatg
acggtaaatgaccaaagcagcggtcaaccggaggagaaccgaaacgtcaaggaggaacct
ggaataaactcagcgttaaactcaggagcgtctggaaaaggagactctgaacctcaaaaa
gcagaaaagctgaataagatgattcagcaggaacaaggggtgaacggcgggctggtcagc
gtcgtcaaacttaagaagatcgggtttgtttcggaacagaagagggttccactggaggaa
gcgtcttccgaactccagaaagaaggaatccggctgaagatcaagatcccaccgcaccgg
agaaacaaattacggagaaaagaaggaaaggaggagatgaaaacccgagaggggcagaaa
gaagggaggccgctgaggagatctgcacggatctgcagatcatctgctttgccaaactgc
aggccaagctcaaaggcggcagagagccagagaaagaaaccgcaaaagaaacagacgccg
cctgccagaacgagggatgaagaagaggtggatgaggaagaggacgatgaggagcagaac
tcaccttcaacaaagaaccaaaaacacgaactcgctggaaaatttagcaagcgaaggggc
aaacgaaggcacgggcgaccacgatggaccaatgttcgccccaagagacacaaaccaaat
gaggaggaggaagaggaggaaggcgggtggaagaaacgaggagaggaggagaaggaagga
agcggctcagaggaggagttgagtaaatctgaggagattcccactgaggatgcctgcact
cactgtggcctgcccaaccacccagaactgatcctgctgtgtgactcgtgtgatcaggga
taccacaccgcctgtctgcggccgccgctcatgctgatcccagacggagaatggttctgt
ccaccttgccaacataagatgctgtgtgagaaactggaggagcagctgcagaacctggac
agcgctctgaagaagaaggaacgggcagagcggaggagggaacggctggtttacgtcggc
atcagtgtggagaacatcattcctgagggagatgtggaagaggaggaggaggaggaagag
gaagagaaatctaccaagaaaaaagatacaaaaaagaccaaaaacctggggaggagatca
accaggaccaggaaacacatcagctacaggtttgatgatttcgatgacgccatcgatgag
gccatagaggaggacatcagggatctctgcagtggagcagaaacggggaaagagatcccc
tccgttgtgtccgagggcgtgaaggagaaccagcggccaatcagaacccagagccgcacc
gccaggaacaagaagagacggcggctgaacgacctggagagcgacagcacggcgatagag
agcgaagaagagttcatgctcagcaacagctcggaggaagaagaatttgccgcttcgggt
gccgacgacggcgaggaggacgatgaagatgcaggcagcgacggcggcagctgggacaga
ggcgcgcgtcccaaacggggcacgagagggacgcctaaattcaaacccaggatgccccaa
cgccggggcaggaaacggcggcggaggcggtccagcgaggaggaggaagagacggatgta
gagatggattcagatcggttcagcgacatgacggacagcgacgcagacaggaagaggcgt
ggcctgaggcggggccagcgccagcaggtgaactaccgcgaaacatcggagtcgtccgac
aactccaggacgttggccaagcggcagccggtgaaacggcgcggccgaccgcggaaggag
catttctccagcgactacagcgacgtttccgcttcctcgagagattctgaggatgatgac
gatgacaatgatgaggaggaagatggccgacggagagtggacaagagaagaagaagagga
gcggaggaggaggaactccggagcggcaggacgagaaaaaagcggaaaagatacgaagat
gagaaggacgaggaaggagggcggcggctgaagaggaggcagctgaggagggaggatgaa
gatgatgatgggaggaagaggaggacggagagagacgaagaggatccggagcggatgggc
cgggggaagaggagggagatgctttcgcagcagcgccgcaaactcctcgctcagatgctg
aagaaacgccggccgtccaccgacgaagacgagtccgactcggacgattctcagtcttca
tcgggagacgaccgcccaatccgcaagagactcaaccgcatcgactccgatgacgacgag
gacgagagacgcgtcgatacggacgacgaagacgaaggacagaagaggaaaaagtcggag
cacaaaagcgacggcggagctcaggaaaaggggcggagcctgtctccatcaaacggacac
cagacctccagagacgctgagagacgggagagacacaacggccccacgcatcccgccgaa
gatgaggaggaggaagaggacgaggaggaggaggaggatgaaggccagtcggactcattg
aactctgcccagaacagcccgcggtcatga
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