Xiphophorus couchianus (Monterrey platyfish): 114133471
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Entry
114133471 CDS
T05908
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04517
IgSF CAM signaling
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114133471 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114133471 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114133471 (sptbn4)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114133471 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
114133471 (sptbn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CREPT
TatB_C
Helical_needle
PH_20
Motif
Other DBs
NCBI-GeneID:
114133471
NCBI-ProteinID:
XP_027855189
LinkDB
All DBs
Position
18:3537819..3617218
Genome browser
AA seq
2673 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHSLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTADNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNVA
EHHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIETK
TIINRYDALASDLLEWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPQDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
MELSSEMEKEGYYDIRRILACKENILGQWSLLKELVAGRRTRLEKNLAMQKTFQDMVYMI
DWMEDTQALLLSKDFGKHLLEVDDLLQKHSLQEADISIQAERVETLNAAALKFTTIEGYQ
PCDPQVICNRVNHVSSCVEELKQQAAKRRAELEESRQLWAFFQELEESEAWIREKSSILA
SQGFGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKRGKQILSEKSFGTAGIQERIMEV
KDEWKKLEDQAAQHLGHLQEALNFFQFSTETDDVAAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTEAIDKHRLHVVALRKHMVVLSLQYREQEEVQVRLGEVEQLYMEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLEKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNEIVQQLLDGGHPSSAEVRGCQDHLNSRWNTIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEFL
AAAHPSRTMEILVPFDGINVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEGAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERIDTLAKRGNRNRV
LAQQWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKEGQQLIKEKPELSPVVRKKLEEIRECWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLHTMETQMEEWYKEAGQLQVQ
TGSIPQQTQIQGTVVERQAAVETRMARLIEPLKERRRLLLASKEVHQVGRDLEDEILWVQ
ERLPLAMNQEHGSSLQAVQQLMKKNQTLQRELEGHRSRIEDVLERAGIIATIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLLLEQTIEDYAETIGLLSQQCRQLLEMGHPDSERISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVSVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCKEILAQIEDKHRRIPEVRARQGSTPNTSTLQRLLQSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQCWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRCAEKSNSWRDVSSVEVLMNYHQSLKSEVEARSQSTLECIE
MGKMLLAARNPAAEEIKEKLEKVVAKQRELSEKWDKHWEFLQQLLEVHQFAQEAMVAEAW
LTAQEPLISSKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLRAEQSKL
PPTPLLGRKVFLDPQDAAPGPATLPRLPVSPVMRQTIYEQNEATTPPSPSPATPTPSPSA
AARRLASAVVNSSGYRHGGMVAVQPAASSIASVATAAMLVSANQMRESASTAKEQATKAM
SYLQPEAKTSPYLRQPKIKHLDDAVTPLIVASRLERGRERGREREERAEVAVMAEVVLQE
PGRERLHSEPTRGPRGSRTDPLGRAEPQVQAYQRQLSSEQLIQARRDELPQEVWREQAGR
RDRRTLERQTSSEQEGHEGRRRERERHRVERQESSDNDVGREQSDRRSTGGEKRTTMAEI
VEQLQEREAAQARGEVPRLPNGLPEKSSRPDRPRARDRPKPRRRPRPKEPGETTRRSRSA
PAQSSQATPQPPTHTAHHEGFLFRKLDIESMKKSTNSRSWVNLYCVLNKGELGFYKDAKN
TATPYNNEPLLSLSHCHCDVTNGYKKKKNVFTLKTKDGSEFLFHAKDEEDLKVWVNNITA
SISEHEEIAKWGQPQLTTSSTDEGTRRDGSKVDNRSDRGGERSDRGDQIERADKEKEREK
EKEKEKERERGERSEKSDRAGKSDGKRSEKKKK
NT seq
8022 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctctccagacctggacaatgcagaagcccagcgccagctcaacaacaac
aaccgaccaatcagctccgggttctgggagaccgagtgcaccagcgccaaactgttcgag
tgttcccgcatcaaggctctggcagatgagagagatgcagtgcagaagaaaaccttcaca
aagtgggtcaactcccacctggccagagtgtcctgtcgcatatctgacctctacaacgac
cttagggatggctacatgctcaccagactgctggaggttctcagtggggagctactgccg
agacctacgaggggtcgtatgcggatccacagcctggaaaacgtggacaaagctctgcag
ttcctgaaagagcagagagttcatctggaaaacgtcggttcccacgacattgtggatgga
aaccatcgcctcacgctcggccttatctggaccatcatccttcgctttcagatccaggtg
atcaaaataaacacagcggacaacagagagacccgctccgccaaggacgcgctgctgctg
tggtgccagatgaagaccgcagggtacccagaggtaaacattcagaacttcaccacctgc
tggagagacggcctggccttcaacgccctcatacacagacacagaccggacctgatagag
ttccacaagctgacgcgctccaatgcgacgcacaacctgcagcaagccttcaacgtcgcc
gagcaccacctgggtctcaccaaactcctggacccggaggatgtgaacacggagaatcca
gatgaaaagtccatcattacgtacgtggtctcctactaccattacttctccaagatgaag
gctcttattgtggaggggaagagggttggcaaggtgttggacaactgcatcgagacaaaa
acgatcatcaaccgctacgacgctctggcgtcggacctgctggagtggatcgagaaaacc
atcgccatcatcagcaaccagaaattcgccaactcactgactggagtccagcagcagctg
caggccttcacaacctactgcactatagagaagcccatcaagtttcaggagaaaggaaac
cttgaggtccttctgttcaccatccaaagcaaactcagagccaataaccagaaaccctac
gtgcctcaagacgggaagctcatctcagacatcaacaaggcctgggagcgcttggagaag
gcggagcatgagaggggcgtggctctgcgtaaggagctgattcgtcaggagaagctggag
ttgctagctcaacgcttcgatcacaagacgaccatgaggcaagcctggctcaacgagaac
cagagactcgtgtcgcaggataacttcggctacgatctgccggccgtggaggcggcgatg
aagaagcacgaggccatcgaggcggacatcgcctcgtacgaggagcgcatcggcgtggtg
atggagctctcctcggagatggagaaggagggatactacgacatccggcgcatcctggcc
tgcaaagagaacatcctgggccagtggagcctgctgaaggagctggtggctggcaggcgg
acccggctggagaagaacctggctatgcagaaaacctttcaggacatggtctacatgatc
gactggatggaggacacacaggctctgctgctgtcaaaggacttcgggaagcatctcctg
gaagtggacgacctgctgcagaagcacagcctgcaggaagctgacatttccattcaggcg
gagagagtcgagacgctcaatgctgcggcgctcaaattcaccaccatcgagggctaccag
ccgtgcgacccgcaggtgatctgtaaccgtgtgaaccacgtctcttcctgtgtggaggaa
ctgaaacagcaagccgctaaacgccgcgcggagctggaggagtcgaggcagctgtgggcg
tttttccaggagctggaggagtcggaggcctggatacgggagaaaagctccatcctggcg
tctcaaggcttcgggaaggacctgagcagcgtgttgaggttgctacagaaacacaagact
ctggccggggagctgctggcgcaccgctcgctgctgcagaacaccataaagcgggggaaa
cagattctgagcgaaaagagctttggcacggcggggatccaggagcgcatcatggaggtg
aaagacgagtggaagaagctggaggaccaggcggcgcagcatctcggccacctgcaggag
gcgctcaacttcttccagttctccacggagacggacgacgtggcggcgtggctgcaggac
gcctaccgcctggtctccagcgaggactttggccacgatgaatactccactcagtcgctg
ctaaagaagcacaagggcgtgacggaggccatcgataaacacaggttacatgtagttgct
ctgcgcaaacacatggtggtgctgtctctgcagtacagagagcaggaggaggttcaggtg
cgtttgggtgaggtggagcagctgtacatggaggtcgcagaggtcgccgttctcagacag
cagtggctccacgacgcgctcgccgtgtaccgcatgttcagcgaggtgaacgcctgcgag
ctctggatcgacgagaaggagcagtggctggagaagatggagatcccggagaagctggag
gacgtggaggtggtggcgcacaggtttgaaagtctggaccaggagatgaacagcctgatg
ggacggatcctggacgtcaatgagatcgttcagcagctgctggacggaggtcatccgtct
tcagcggaggtcagaggttgtcaggatcacctcaactccaggtggaacaccatcgttgag
ctggtggagcagaagaaggatcagctcgactcgatgcttcgcctgcagaattacctcctg
gagtgcgccgagatcaagtcccagatccaggacaagaggaaagccatcgacgccacgcag
tacatgggcagcgacctgggaggcgtccttgctctgcagcgacgcctctccaccatggag
ggggcgctgtctgtcctggagcccaaactgctgcatctacaggaggaagcagagtttcta
gccgccgctcatcccagccgaaccatggagatcctggtgccgttcgatggcatcaacgtc
gagtgggaggagcttaaaaggacgctacagggatgtgaggactcgctgatggtggccagc
aggctgcagagcttcatacaggacctggactccttcctcacctggctggtccagacccaa
acggccgctgcctcggaccagctgcccaacgatctggaggaggcggagaaactcatcaac
aagcacgccgctctcaaagaggagatcggccggtacgaggaagactacgagcgtctgcag
gccatgaacgagctgctggagtcggaggacgcccccctgccgcaggccgccctgcagcag
tggctgcagaagctcgacgtcggctggaacaagctcctggagatgtgggagagccggagg
gaggttctggtccaagctcacatctttcacctgttcctgcgagacgtcaaacaagcggag
tccttcctgaacaaccaggaatcggctctggcccacgtggagctccccaccacggtggaa
acggtcgaaggcgccatcaagaaacataaggatttcactaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggcgggagaaagcctgatcagccagaacaacatctac
tccgagcgaatccgggagcgcatcgacactctcgccaagaggggaaaccggaacagggta
ctggcccagcaatggctggaaaaactgaacgaccagtgggaacttcagagatttctccaa
gactgtcatgagctgggggactgggtgtacgaaaagatgctgatggcgagggacagcagc
cgagacgagacccagaagctgcacaagaagtggcagaagcaccaggctttcatggccgag
ctggcccagaacaaggaatggctggataaaatcgaaaaggaagggcagcagctgataaag
gaaaagccggagctgagcccggtggtccggaagaagctggaggagatccgggagtgctgg
ctggacctggagagcaccactcaggccaaagctcgccagctgtttgaggccaacaaggcg
gacctgctggttcagagctacgaaagcctggaccagcggctggggcagctggaggggcag
ctggcctacgtggatcagggtcaggacctcaccactgtcaacaagcagctcaagaagcta
cataccatggagacccagatggaggagtggtataaggaggcggggcagctccaggtccag
acaggctccatcccgcaacagacacagatccagggcacggtggtggagcggcaggccgcc
gtggagaccaggatggcccgactcatcgagccgttgaaggagaggcggcgccttcttcta
gcgtctaaggaggtccatcaagttgggcgagacctggaggacgagattttgtgggtccag
gagcgcctccctctggccatgaaccaggagcacggctcatcgctgcaagccgtccagcag
ctcatgaagaagaaccagacgctccagagggagctggagggccacaggagcaggatagaa
gacgtcctggagagggcagggatcatcgccaccatcaggagcccagaggccgactgcgtc
agggcgggccacgaccagctggcccagctgtgggccctgctgtgggccgagacggagcgc
aggcagctggttctggacgccatgtaccaagcccagcagtactacttcgacacggccgag
gtcgaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaagggaaaggac
gagccgagcacgctgcagctgctgaagaaacatttgctgctggaacaaaccatcgaggat
tatgctgagaccatcggcctgctgtcgcagcaatgtcgccagctgctggaaatgggacat
ccagacagcgaacggatcagcaagcgtcagtcgcagattgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctgtaccagctc
aacagggaggtggacgagctggagcagtggatcgcccagagggaagtggtggccagctcg
cctgaactgggccaggactttgagcacgtctccgtcctccaggaaaagttcacagagttt
gcgtcggagacaggaagtgtgggacaggagcgcgtgacggccgtcaatcagatggtggac
gagctcatcgactatggccactctgaggccgccaccatcgccgagtggaaggacggggtc
aacgaggcctgggccgacctgctggagctcatggagacccgagcgcagatgctcgctgct
tctcaccagctgcacaagttcttctccgactgcaaagagatattggcccagattgaggat
aagcaccggcggatcccagaggtccgggctcggcagggcagcacgcccaacaccagcacg
ctgcagaggctcctgcaaagcttcgaacaggacatccagctgctggtcactcaggtgcgt
cagctgcaggaaagcgcggcccagctgaggacggtgtacgcaggcgagaaggccgaagcc
atcgcttgccgtgagcacgaagtgatgcagtgctggaaggagctgctgacttcctgcgaa
gagtgccggctgcagatcaccacggaaacggacaagctgaggttcttcagcatggtccgg
gatcagatcatgtggatggagtccatcatctgtcagatcggcaccggggagaaacccagg
tgtgcagaaaagtccaacagctggagggacgtgtcgtcggtggaggtgttgatgaactac
caccagagcctgaagagcgaagtggaggcccgcagccagagcacgctggagtgcatcgaa
atgggaaaaatgctgctggctgctagaaaccctgcagctgaagagatcaaggagaagcta
gaaaaggtggttgcgaagcagcgtgagctttcagagaagtgggacaaacactgggagttc
ctccagcaactgttggaggttcaccagttcgcccaggaggcgatggtggcggaggcctgg
ctgacggctcaggaaccgctgatcagcagcaaggagctgggcggcagcgtggacgaggtg
gagcagctcatacggcgacacgaagccttccggaaagccgccgccacctgggaggagaga
ttcagctcgctgcggcgtctcactacggtggaaaagttgagagcggagcagagcaagctg
ccgccgacgccgctgctgggccgtaaagtcttcctggaccctcaggacgcggcgccgggc
ccggctacgctgccccgcctccccgtctcccccgtcatgaggcagaccatctacgagcag
aacgaagccaccacaccgccgtccccctcgcccgccacgcccacgccgtccccgtcggcg
gccgcccgccggctcgcctccgccgtcgtcaacagctccggctaccggcacggcggcatg
gtggccgtccagccggccgcttcatccatcgcctccgtcgccacggcggccatgttggtt
tcggccaatcagatgcgggaaagcgccagcacggcgaaggaacaggcgacgaaagccatg
agctacctgcagccggaggcaaagacgtcaccgtatctacggcaaccgaagatcaaacac
ttggacgacgcggtgacgccgctgatcgtggcgagccgcctggagcgagggagagagcga
gggagggagagagaggagcgcgcggaggtggcggtgatggcggaggtggtgctccaggaa
ccgggccgggagcggctgcacagcgagcccaccagggggccccgtgggtccagaaccgac
ccgctgggccgcgccgagccgcaggtccaggcataccagcggcagctgtccagcgagcag
ctgatccaggcgcggcgcgacgagctgccgcaggaagtctggagggagcaggcgggacgg
cgcgacaggcggacgctggagcggcagacgtccagcgaacaggaaggacacgaaggccgg
cggagagagagagagcgccaccgagtggagaggcaggagtccagcgacaatgacgtgggg
agggagcaatccgaccgacgctccactggaggagagaagagaaccaccatggcagaaatt
gtagagcagcttcaagaaagagaagcagcacaggcgcgcggcgaggttccccgcctgccc
aacggtctgccagaaaagtcttcccgtccggaccggcccagagcccgggaccgacccaaa
cccagacggcggccgcgccccaaagagccgggagagacgacgcggcgttcccgatcggct
ccggcccagagcagccaggcgacgccgcagcctccgacccacacggcgcatcacgagggc
ttcctgttccgcaagctggacatcgagagcatgaagaagagcaccaacagcaggtcatgg
gtcaacctgtactgcgtgctgaacaaaggggagctgggcttctacaaggatgccaagaac
acggcgacgccctacaacaacgagccgctgctcagtctgtcccactgccactgcgacgtc
accaatggatacaagaagaagaagaacgtcttcacgctcaaaacgaaggatggcagtgaa
tttctgtttcatgcaaaagacgaggaggacctcaaagtgtgggtgaacaacatcaccgcc
agcatttcagagcacgaggaaatcgccaaatggggccagccccaactaactacctcatcc
accgacgaagggacgcggcgagacggcagcaaggtggacaaccggtccgaccgcggcggc
gagcgctccgaccgtggagaccaaatagagcgtgcggacaaagagaaggaacgggagaag
gagaaagagaaggaaaaagaaagggagagaggggaacgctcagagaagtcagatcgggca
ggaaagtcggacggaaaacgctcagagaagaagaagaaatga
DBGET
integrated database retrieval system
