Xiphophorus couchianus (Monterrey platyfish): 114133471
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Entry
114133471 CDS
T05908
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114133471 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114133471 (sptbn4)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114133471 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
114133471 (sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
CREPT
DUF1940
PH_20
Motif
Other DBs
NCBI-GeneID:
114133471
NCBI-ProteinID:
XP_027855189
LinkDB
All DBs
Position
18:3537819..3617218
Genome browser
AA seq
2673 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHSLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKINTADNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNVA
EHHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIETK
TIINRYDALASDLLEWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPQDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
MELSSEMEKEGYYDIRRILACKENILGQWSLLKELVAGRRTRLEKNLAMQKTFQDMVYMI
DWMEDTQALLLSKDFGKHLLEVDDLLQKHSLQEADISIQAERVETLNAAALKFTTIEGYQ
PCDPQVICNRVNHVSSCVEELKQQAAKRRAELEESRQLWAFFQELEESEAWIREKSSILA
SQGFGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTIKRGKQILSEKSFGTAGIQERIMEV
KDEWKKLEDQAAQHLGHLQEALNFFQFSTETDDVAAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHKGVTEAIDKHRLHVVALRKHMVVLSLQYREQEEVQVRLGEVEQLYMEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLEKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNEIVQQLLDGGHPSSAEVRGCQDHLNSRWNTIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEFL
AAAHPSRTMEILVPFDGINVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEGAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERIDTLAKRGNRNRV
LAQQWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWQKHQAFMAE
LAQNKEWLDKIEKEGQQLIKEKPELSPVVRKKLEEIRECWLDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLHTMETQMEEWYKEAGQLQVQ
TGSIPQQTQIQGTVVERQAAVETRMARLIEPLKERRRLLLASKEVHQVGRDLEDEILWVQ
ERLPLAMNQEHGSSLQAVQQLMKKNQTLQRELEGHRSRIEDVLERAGIIATIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLLLEQTIEDYAETIGLLSQQCRQLLEMGHPDSERISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVSVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCKEILAQIEDKHRRIPEVRARQGSTPNTSTLQRLLQSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQCWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRCAEKSNSWRDVSSVEVLMNYHQSLKSEVEARSQSTLECIE
MGKMLLAARNPAAEEIKEKLEKVVAKQRELSEKWDKHWEFLQQLLEVHQFAQEAMVAEAW
LTAQEPLISSKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLRAEQSKL
PPTPLLGRKVFLDPQDAAPGPATLPRLPVSPVMRQTIYEQNEATTPPSPSPATPTPSPSA
AARRLASAVVNSSGYRHGGMVAVQPAASSIASVATAAMLVSANQMRESASTAKEQATKAM
SYLQPEAKTSPYLRQPKIKHLDDAVTPLIVASRLERGRERGREREERAEVAVMAEVVLQE
PGRERLHSEPTRGPRGSRTDPLGRAEPQVQAYQRQLSSEQLIQARRDELPQEVWREQAGR
RDRRTLERQTSSEQEGHEGRRRERERHRVERQESSDNDVGREQSDRRSTGGEKRTTMAEI
VEQLQEREAAQARGEVPRLPNGLPEKSSRPDRPRARDRPKPRRRPRPKEPGETTRRSRSA
PAQSSQATPQPPTHTAHHEGFLFRKLDIESMKKSTNSRSWVNLYCVLNKGELGFYKDAKN
TATPYNNEPLLSLSHCHCDVTNGYKKKKNVFTLKTKDGSEFLFHAKDEEDLKVWVNNITA
SISEHEEIAKWGQPQLTTSSTDEGTRRDGSKVDNRSDRGGERSDRGDQIERADKEKEREK
EKEKEKERERGERSEKSDRAGKSDGKRSEKKKK
NT seq
8022 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctctccagacctggacaatgcagaagcccagcgccagctcaacaacaac
aaccgaccaatcagctccgggttctgggagaccgagtgcaccagcgccaaactgttcgag
tgttcccgcatcaaggctctggcagatgagagagatgcagtgcagaagaaaaccttcaca
aagtgggtcaactcccacctggccagagtgtcctgtcgcatatctgacctctacaacgac
cttagggatggctacatgctcaccagactgctggaggttctcagtggggagctactgccg
agacctacgaggggtcgtatgcggatccacagcctggaaaacgtggacaaagctctgcag
ttcctgaaagagcagagagttcatctggaaaacgtcggttcccacgacattgtggatgga
aaccatcgcctcacgctcggccttatctggaccatcatccttcgctttcagatccaggtg
atcaaaataaacacagcggacaacagagagacccgctccgccaaggacgcgctgctgctg
tggtgccagatgaagaccgcagggtacccagaggtaaacattcagaacttcaccacctgc
tggagagacggcctggccttcaacgccctcatacacagacacagaccggacctgatagag
ttccacaagctgacgcgctccaatgcgacgcacaacctgcagcaagccttcaacgtcgcc
gagcaccacctgggtctcaccaaactcctggacccggaggatgtgaacacggagaatcca
gatgaaaagtccatcattacgtacgtggtctcctactaccattacttctccaagatgaag
gctcttattgtggaggggaagagggttggcaaggtgttggacaactgcatcgagacaaaa
acgatcatcaaccgctacgacgctctggcgtcggacctgctggagtggatcgagaaaacc
atcgccatcatcagcaaccagaaattcgccaactcactgactggagtccagcagcagctg
caggccttcacaacctactgcactatagagaagcccatcaagtttcaggagaaaggaaac
cttgaggtccttctgttcaccatccaaagcaaactcagagccaataaccagaaaccctac
gtgcctcaagacgggaagctcatctcagacatcaacaaggcctgggagcgcttggagaag
gcggagcatgagaggggcgtggctctgcgtaaggagctgattcgtcaggagaagctggag
ttgctagctcaacgcttcgatcacaagacgaccatgaggcaagcctggctcaacgagaac
cagagactcgtgtcgcaggataacttcggctacgatctgccggccgtggaggcggcgatg
aagaagcacgaggccatcgaggcggacatcgcctcgtacgaggagcgcatcggcgtggtg
atggagctctcctcggagatggagaaggagggatactacgacatccggcgcatcctggcc
tgcaaagagaacatcctgggccagtggagcctgctgaaggagctggtggctggcaggcgg
acccggctggagaagaacctggctatgcagaaaacctttcaggacatggtctacatgatc
gactggatggaggacacacaggctctgctgctgtcaaaggacttcgggaagcatctcctg
gaagtggacgacctgctgcagaagcacagcctgcaggaagctgacatttccattcaggcg
gagagagtcgagacgctcaatgctgcggcgctcaaattcaccaccatcgagggctaccag
ccgtgcgacccgcaggtgatctgtaaccgtgtgaaccacgtctcttcctgtgtggaggaa
ctgaaacagcaagccgctaaacgccgcgcggagctggaggagtcgaggcagctgtgggcg
tttttccaggagctggaggagtcggaggcctggatacgggagaaaagctccatcctggcg
tctcaaggcttcgggaaggacctgagcagcgtgttgaggttgctacagaaacacaagact
ctggccggggagctgctggcgcaccgctcgctgctgcagaacaccataaagcgggggaaa
cagattctgagcgaaaagagctttggcacggcggggatccaggagcgcatcatggaggtg
aaagacgagtggaagaagctggaggaccaggcggcgcagcatctcggccacctgcaggag
gcgctcaacttcttccagttctccacggagacggacgacgtggcggcgtggctgcaggac
gcctaccgcctggtctccagcgaggactttggccacgatgaatactccactcagtcgctg
ctaaagaagcacaagggcgtgacggaggccatcgataaacacaggttacatgtagttgct
ctgcgcaaacacatggtggtgctgtctctgcagtacagagagcaggaggaggttcaggtg
cgtttgggtgaggtggagcagctgtacatggaggtcgcagaggtcgccgttctcagacag
cagtggctccacgacgcgctcgccgtgtaccgcatgttcagcgaggtgaacgcctgcgag
ctctggatcgacgagaaggagcagtggctggagaagatggagatcccggagaagctggag
gacgtggaggtggtggcgcacaggtttgaaagtctggaccaggagatgaacagcctgatg
ggacggatcctggacgtcaatgagatcgttcagcagctgctggacggaggtcatccgtct
tcagcggaggtcagaggttgtcaggatcacctcaactccaggtggaacaccatcgttgag
ctggtggagcagaagaaggatcagctcgactcgatgcttcgcctgcagaattacctcctg
gagtgcgccgagatcaagtcccagatccaggacaagaggaaagccatcgacgccacgcag
tacatgggcagcgacctgggaggcgtccttgctctgcagcgacgcctctccaccatggag
ggggcgctgtctgtcctggagcccaaactgctgcatctacaggaggaagcagagtttcta
gccgccgctcatcccagccgaaccatggagatcctggtgccgttcgatggcatcaacgtc
gagtgggaggagcttaaaaggacgctacagggatgtgaggactcgctgatggtggccagc
aggctgcagagcttcatacaggacctggactccttcctcacctggctggtccagacccaa
acggccgctgcctcggaccagctgcccaacgatctggaggaggcggagaaactcatcaac
aagcacgccgctctcaaagaggagatcggccggtacgaggaagactacgagcgtctgcag
gccatgaacgagctgctggagtcggaggacgcccccctgccgcaggccgccctgcagcag
tggctgcagaagctcgacgtcggctggaacaagctcctggagatgtgggagagccggagg
gaggttctggtccaagctcacatctttcacctgttcctgcgagacgtcaaacaagcggag
tccttcctgaacaaccaggaatcggctctggcccacgtggagctccccaccacggtggaa
acggtcgaaggcgccatcaagaaacataaggatttcactaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggcgggagaaagcctgatcagccagaacaacatctac
tccgagcgaatccgggagcgcatcgacactctcgccaagaggggaaaccggaacagggta
ctggcccagcaatggctggaaaaactgaacgaccagtgggaacttcagagatttctccaa
gactgtcatgagctgggggactgggtgtacgaaaagatgctgatggcgagggacagcagc
cgagacgagacccagaagctgcacaagaagtggcagaagcaccaggctttcatggccgag
ctggcccagaacaaggaatggctggataaaatcgaaaaggaagggcagcagctgataaag
gaaaagccggagctgagcccggtggtccggaagaagctggaggagatccgggagtgctgg
ctggacctggagagcaccactcaggccaaagctcgccagctgtttgaggccaacaaggcg
gacctgctggttcagagctacgaaagcctggaccagcggctggggcagctggaggggcag
ctggcctacgtggatcagggtcaggacctcaccactgtcaacaagcagctcaagaagcta
cataccatggagacccagatggaggagtggtataaggaggcggggcagctccaggtccag
acaggctccatcccgcaacagacacagatccagggcacggtggtggagcggcaggccgcc
gtggagaccaggatggcccgactcatcgagccgttgaaggagaggcggcgccttcttcta
gcgtctaaggaggtccatcaagttgggcgagacctggaggacgagattttgtgggtccag
gagcgcctccctctggccatgaaccaggagcacggctcatcgctgcaagccgtccagcag
ctcatgaagaagaaccagacgctccagagggagctggagggccacaggagcaggatagaa
gacgtcctggagagggcagggatcatcgccaccatcaggagcccagaggccgactgcgtc
agggcgggccacgaccagctggcccagctgtgggccctgctgtgggccgagacggagcgc
aggcagctggttctggacgccatgtaccaagcccagcagtactacttcgacacggccgag
gtcgaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaagggaaaggac
gagccgagcacgctgcagctgctgaagaaacatttgctgctggaacaaaccatcgaggat
tatgctgagaccatcggcctgctgtcgcagcaatgtcgccagctgctggaaatgggacat
ccagacagcgaacggatcagcaagcgtcagtcgcagattgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctgtaccagctc
aacagggaggtggacgagctggagcagtggatcgcccagagggaagtggtggccagctcg
cctgaactgggccaggactttgagcacgtctccgtcctccaggaaaagttcacagagttt
gcgtcggagacaggaagtgtgggacaggagcgcgtgacggccgtcaatcagatggtggac
gagctcatcgactatggccactctgaggccgccaccatcgccgagtggaaggacggggtc
aacgaggcctgggccgacctgctggagctcatggagacccgagcgcagatgctcgctgct
tctcaccagctgcacaagttcttctccgactgcaaagagatattggcccagattgaggat
aagcaccggcggatcccagaggtccgggctcggcagggcagcacgcccaacaccagcacg
ctgcagaggctcctgcaaagcttcgaacaggacatccagctgctggtcactcaggtgcgt
cagctgcaggaaagcgcggcccagctgaggacggtgtacgcaggcgagaaggccgaagcc
atcgcttgccgtgagcacgaagtgatgcagtgctggaaggagctgctgacttcctgcgaa
gagtgccggctgcagatcaccacggaaacggacaagctgaggttcttcagcatggtccgg
gatcagatcatgtggatggagtccatcatctgtcagatcggcaccggggagaaacccagg
tgtgcagaaaagtccaacagctggagggacgtgtcgtcggtggaggtgttgatgaactac
caccagagcctgaagagcgaagtggaggcccgcagccagagcacgctggagtgcatcgaa
atgggaaaaatgctgctggctgctagaaaccctgcagctgaagagatcaaggagaagcta
gaaaaggtggttgcgaagcagcgtgagctttcagagaagtgggacaaacactgggagttc
ctccagcaactgttggaggttcaccagttcgcccaggaggcgatggtggcggaggcctgg
ctgacggctcaggaaccgctgatcagcagcaaggagctgggcggcagcgtggacgaggtg
gagcagctcatacggcgacacgaagccttccggaaagccgccgccacctgggaggagaga
ttcagctcgctgcggcgtctcactacggtggaaaagttgagagcggagcagagcaagctg
ccgccgacgccgctgctgggccgtaaagtcttcctggaccctcaggacgcggcgccgggc
ccggctacgctgccccgcctccccgtctcccccgtcatgaggcagaccatctacgagcag
aacgaagccaccacaccgccgtccccctcgcccgccacgcccacgccgtccccgtcggcg
gccgcccgccggctcgcctccgccgtcgtcaacagctccggctaccggcacggcggcatg
gtggccgtccagccggccgcttcatccatcgcctccgtcgccacggcggccatgttggtt
tcggccaatcagatgcgggaaagcgccagcacggcgaaggaacaggcgacgaaagccatg
agctacctgcagccggaggcaaagacgtcaccgtatctacggcaaccgaagatcaaacac
ttggacgacgcggtgacgccgctgatcgtggcgagccgcctggagcgagggagagagcga
gggagggagagagaggagcgcgcggaggtggcggtgatggcggaggtggtgctccaggaa
ccgggccgggagcggctgcacagcgagcccaccagggggccccgtgggtccagaaccgac
ccgctgggccgcgccgagccgcaggtccaggcataccagcggcagctgtccagcgagcag
ctgatccaggcgcggcgcgacgagctgccgcaggaagtctggagggagcaggcgggacgg
cgcgacaggcggacgctggagcggcagacgtccagcgaacaggaaggacacgaaggccgg
cggagagagagagagcgccaccgagtggagaggcaggagtccagcgacaatgacgtgggg
agggagcaatccgaccgacgctccactggaggagagaagagaaccaccatggcagaaatt
gtagagcagcttcaagaaagagaagcagcacaggcgcgcggcgaggttccccgcctgccc
aacggtctgccagaaaagtcttcccgtccggaccggcccagagcccgggaccgacccaaa
cccagacggcggccgcgccccaaagagccgggagagacgacgcggcgttcccgatcggct
ccggcccagagcagccaggcgacgccgcagcctccgacccacacggcgcatcacgagggc
ttcctgttccgcaagctggacatcgagagcatgaagaagagcaccaacagcaggtcatgg
gtcaacctgtactgcgtgctgaacaaaggggagctgggcttctacaaggatgccaagaac
acggcgacgccctacaacaacgagccgctgctcagtctgtcccactgccactgcgacgtc
accaatggatacaagaagaagaagaacgtcttcacgctcaaaacgaaggatggcagtgaa
tttctgtttcatgcaaaagacgaggaggacctcaaagtgtgggtgaacaacatcaccgcc
agcatttcagagcacgaggaaatcgccaaatggggccagccccaactaactacctcatcc
accgacgaagggacgcggcgagacggcagcaaggtggacaaccggtccgaccgcggcggc
gagcgctccgaccgtggagaccaaatagagcgtgcggacaaagagaaggaacgggagaag
gagaaagagaaggaaaaagaaagggagagaggggaacgctcagagaagtcagatcgggca
ggaaagtcggacggaaaacgctcagagaagaagaagaaatga
DBGET
integrated database retrieval system
