Xiphophorus couchianus (Monterrey platyfish): 114133533
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Entry
114133533 CDS
T05908
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114133533
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114133533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114133533
Spliceosome [BR:
xco03041
]
Common components
Common spliceosomal components
SR proteins
114133533
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC_3
RRM_5
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
114133533
NCBI-ProteinID:
XP_027855326
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Position
18:4305309..4312548
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AA seq
257 aa
AA seq
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MSYYSSSRSSSRATDCKVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEFE
DPRDAEDAVKGMDGKILCGSRVRVEMSTGLSRKGRGRPSRRQFDPNDRCYQCGDRGHYAY
DCYRYSKRGRRSSRSRSRSRSRSRSRSRGRRYRSHSRSRSRSYSRSRRRSPSYSRRRSRS
GSPARSKSRTPVRSRSRSRSRSGSAPRGRSASRSRSRSPSANHKRASVWWELSTAQTPPL
IPGPGSASWRCAQPAGG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtactactcatcgtcccggagctcgtctcgggccaccgactgtaaagtttacgtg
ggtgaccttggtaacggcgccgccaaaggggagctggagcgggccttcagttactacggg
cccctgaggaccgtgtgggtggccaggaacccacccggcttcgccttcgtggagtttgag
gatccccgagacgcagaggacgcggtcaaaggcatggacgggaagatcctctgtggctcc
cgtgttcgtgtggagatgtccaccggcctgtccaggaaaggccgcgggcgccccagccgc
cgccagtttgaccccaacgaccgctgctaccagtgcggggaccggggccattacgcctac
gactgctaccgttacagcaagagaggccggcgcagcagcaggtcccggtccagatcccgg
tcccgctcacggtccaggtcccgcggacggcgctaccgctctcactcccgcagccgtagc
cgcagctacagccggagccgccgcagatcaccgtcatactccagacgcagaagcaggtct
ggctccccggcccggtccaagtccaggactccagtgagaagccgctccaggtcccgctct
cggtccggttctgcccccagggggcgctctgcatctcgctcccgctctcgatcgccgtcg
gccaaccacaagcgggccagcgtgtggtgggagctgagcactgcacagacaccgccgctg
atcccaggcccagggtctgccagctggcggtgtgcacagcctgcgggagggtga
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