Xiphophorus couchianus (Monterrey platyfish): 114133586
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Entry
114133586 CDS
T05908
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114133586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114133586
Membrane trafficking [BR:
xco04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114133586
Protein recycling
Other Rab GTPase associated proteins
114133586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF7605
CID_GANP
FANCI_S1
Hid1
Motif
Other DBs
NCBI-GeneID:
114133586
NCBI-ProteinID:
XP_027855415
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All DBs
Position
18:23304773..23311444
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AA seq
507 aa
AA seq
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MSQRRGIHVDQSELLCKKGCGFYGNTAWQGLCSKCWREENQREKQRQIQEDWALAERLQR
EEEEAYASRHQRAQSQPAITPFNKFEERKTKEKSSKVNTVTKFFTPSTKTPPKKDAGAAD
AQSTPSSSSSASRQPFPDSDRATQEFIDFLKSVKSGREIFKQCRAFTEGMVYKRDMGADE
LSECVQDFYQSLSDRLHNQFKGSTEHVERVMDEVEKYMMTRLYTEVFCPETTDDEKKDLA
VQKRIRDLHWVTIEMLCVPVDEEIPEVSDSVVKAITDIIEMDSKQVPKDKLACITRCSKH
IFNAIKVSKKEAASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFT
NLCCAVAFIEKLDGQSLNMSSEEFELYMSGQTSPNWPRPTAAASSAGGAAHTQAHSSLDV
LTGLGERQERVVEKARQLESDLIDWTDEVEQKVQSALESFPLDTQSTTTNAAGGTTTTAA
AASSAIDSENVENELLPPPLQPQVFAG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagacgtggcattcatgtggaccaatctgagctgctctgcaaaaaaggatgt
gggttttatggcaacacagcctggcagggcctgtgctcaaagtgttggcgagaggaaaac
cagcgagaaaagcaaaggcaaattcaagaggactgggctcttgctgaaaggctgcagaga
gaggaagaggaagcatatgcaagcaggcatcagagggcacaatcacaacctgcgatcact
cccttcaacaagtttgaagaaaggaagacgaaggagaagtccagcaaagtcaacacagtc
acaaagtttttcactccatcaacaaaaacaccacccaaaaaggatgccggtgctgctgac
gctcagtccactccgagctccagctcctcagccagtcgccagccctttccagacagcgac
cgtgcaacgcaagagtttatagattttctgaagtcggtgaagtctggcagggaaatcttt
aaacagtgtcgggctttcactgagggcatggtgtacaagcgggacatgggagccgacgag
ctgtcggagtgtgtgcaagacttctaccagagcctctcagaccggcttcacaaccagttc
aaaggttcgacagagcatgtagagagggtgatggatgaagtggagaagtacatgatgacc
cgactttacacggaggttttctgtccggaaaccacagacgacgagaagaaagacttggct
gttcagaagagaatcagagatttgcactgggtcaccatagaaatgctgtgcgtgccggtg
gatgaagagatcccggaagtctcagacagtgtagtcaaagctattacagatataattgaa
atggactcaaagcaggtacccaaagacaagctggcgtgcatcacccgttgcagcaagcac
atcttcaacgccatcaaagtgagcaagaaggaggccgcgtcggccgacgacttcctcccg
actctcatctacatcgtgctgaaggcaaaccctccgcggctgcagtccaacatccagtac
atcacccgcttctgcaaccccagccgactcatgaccggagaggacggatactacttcact
aatctgtgctgtgcagtggccttcatagagaaactggatggtcagtctctgaatatgagc
tctgaggagtttgagctctacatgtcgggccagacgtctccgaactggccacggcccacc
gccgccgcctcatccgcaggcggcgcagcccatacccaggcccacagcagcctggacgtg
ctaaccgggctcggcgagaggcaggagcgggttgtggagaaggctcggcagctggagagc
gacctgatagactggacggatgaagtggagcagaaagttcagagcgcgctggagagcttt
cctcttgacacccaaagcaccacgacgaacgcggccggcggaacgacgacaacggcggcc
gcggcgtcgtccgcgatcgactctgaaaatgtagagaacgagctgctgcccccgccgctg
cagcctcaggtgtttgctggttga
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