Xiphophorus couchianus (Monterrey platyfish): 114133589
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Entry
114133589 CDS
T05908
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59 isoform X1
KO
K12028
tripartite motif-containing protein 59
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114133589 (trim59)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114133589 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
BAR_3_WASP_bdg
zf-RING_6
MgrB
Spectrin
ZapG-like
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
114133589
NCBI-ProteinID:
XP_027855418
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Position
18:23444714..23452445
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AA seq
474 aa
AA seq
DB search
MKAAREGSGKEKLLWPLSTENRIYPPLDSCQLFSRCDAASSRPPPAMDSLEEDLTCSVCY
SLFSDPRVLPCSHTFCKNCLENLLQVSTNYSIWRPLRLPIKCPHCRSVVELPPSGVDALP
SNVSLRAIVEKYQRDSEPRAPSCQEHRRQPLNMYCVQDRQLICGLCLTVGQHHGHPIDDL
QAAFVREKQTPALLLARLSEQKWSQVCELGEQLEQEKARCDTLLRQDRQEVNQFFVSLEE
VLARKKQAYLEALSEAAAEVAATYDPLIHTVKELQEEQLDLVSLGSSVEEEDSPLVFLEK
VHQFRDRVEKFIRTPLPSGINLSVTPRAAAYLQQNWPAVTISSLEQAPVPKLCCCTRCDG
GVGTEADPPVPPAWDRWRQLKPTASVALLGLLLLLAALWANPVGGASLGFSLLSRLSQLA
QSLSGSLVSSVWDTMEAECAEMGAAVQRWSSQLSVLRDRVVQQVAALLKTSTSR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagcacgagaaggaagcggaaaggagaagctgttgtggccactttccactgaa
aataggatttatccaccgctggactcctgccagctgttcagcaggtgcgacgccgcgtcg
tcccgtccgcctccagcgatggacagcctggaggaggacctgacctgctctgtgtgctac
tcgctgttctccgacccgcgcgtcctgccgtgttcccacaccttctgcaagaactgcttg
gagaacctgctgcaggtgtccaccaactactccatctggcgcccgctgcgcctgcccata
aaatgtccccactgccgcagcgtggtggagctgccgccgagcggcgtggacgcgctcccg
tccaacgtgtccctgcgagccatcgtcgagaaataccagagggacagcgagccgcgggcg
ccgtcctgccaggagcaccgcaggcagccgctcaacatgtactgcgtccaggaccggcag
ctgatctgcggcctgtgcctgaccgtcggccagcaccatggccatcccatagacgacctg
caggcggcctttgtcagagaaaaacaaaccccggcgctgctgctggccaggctctcggag
cagaagtggagtcaggtgtgtgagctgggggagcagctggagcaggagaaggcgcgctgc
gacactctgctgaggcaggaccggcaggaggtcaaccagttttttgtctctttagaggag
gtgctggccaggaagaagcaggcctacctggaggctctgagcgaggctgctgcagaggtg
gctgcgacctacgaccccctcatccacacagtcaaggagctgcaggaggagcagttggac
ctggtgtctctgggctcgtctgtggaggaggaagactcccccctggtgtttttggagaaa
gtccatcagttcagagatcgggtggagaagttcatcagaaccccgctgccctccgggatc
aacctgtcggtgacgccacgcgcagcggcttacctgcagcagaactggcccgcggtgacc
atcagcagcctggagcaggcgccggttcccaagctgtgctgctgcaccagatgcgacggt
ggcgtcggcacagaggcagacccgcctgtcccacctgcctgggacaggtggcgccagctg
aagcccaccgcttcggtggctctgctgggcctgctgctgctgctggcggcgttgtgggcc
aaccccgtcggaggcgcgtcgctcgggttctccctcctttcccgcctcagtcagctggcc
cagagtctgagcggcagcctcgtctcgtccgtgtgggacacaatggaggcggagtgcgca
gagatgggggctgcagtgcagaggtggagctcgcagctgtctgtcctcagagaccgagtt
gttcagcaggtggctgctttacttaaaacgtcgacgtctcgctga
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