Xiphophorus couchianus (Monterrey platyfish): 114133862
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Entry
114133862 CDS
T05908
Name
(RefSeq) spectrin beta chain, erythrocytic-like isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114133862
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
114133862
Intermediate filaments
Intermediate filament-binding proteins
114133862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DYH2-5-8_CC
YIEGIA_cap
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
114133862
NCBI-ProteinID:
XP_027855779
LinkDB
All DBs
Position
19:5532447..5579719
Genome browser
AA seq
2487 aa
AA seq
DB search
MSSPCLLRTAPISQPRLREVKISLKASSRDAGAVRSSKETASRPFTPAEKEAQVRVGVSS
SSRSRSTPPVHRTLRPESRKATSKQQVPEQHPERNGTFLHIPPTSVPTGLSPFSSSSSSS
SSCTPRRPRPSQTHPDLAPILSSSSSSSSARSMKRARWLSYSTSNICFNSILDGRFRQLQ
DEREAVQKKTFTKWVNSILSRVGCRISDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMR
IHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIIVETGQA
DQKETHSAKDALLLWCQMKTAGYPNVNITNFTNSWKDGMAFNALIHKHRPDLVDYTKLKR
SNPTHNLQNAFNVAEQKLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKQLAVEG
KRVGKVLDQAIETERMIDKYETLASDLLTWIEQTIVVLNNRKLANSLTGVQQQLQAFNTY
RTVEKPPKFQEKGNLEVLLFTIQSRMRANNQRVYMPKEGALVSDINRAWERLERAEHERE
RVLRDELIRQEKLEQMARRFDRKAAMRETWLLENQRLVAQDNFGYDLPAVEAAKKKHDAI
ETDIAAYEERVQALVNISKELESERYHDAKRIDVRKDNILRLWDYLQELLRSRRGRLDMN
LTLQRIFQEMLYIISWMDEMKARLLSPDFGKHLLEVEDLLQKHALLENDIALQAERVQSA
SAAALKFANGDSYKPCDPQVIRDRVQHLNLCYQELCTLAAQRRARLEQSRRFWNCLWEVA
ELESWIREKEQLFSSLDYGKDLTSMLVLQSKHSAFEDELGARRNNLQQVLAEGDKMIQAK
HFGSPKIQECMDDIRRQWQQLEDLAAFRKQNLRDTQTFFQFQGDADELKAWLLDAKRQMS
SNDVGHDEYTTQRLLKNQNNLRNEAIKNGATIDALSKQASALPEELQNTPDIQRRLKDIK
DLYMELLTLADLRQKKLDDTMALYTIFSETDACELWMSMKETWLVDLEVPENLEDLEVVQ
NRLSALAQEMVNVQSRVDDVNKAAKQLEESRHPRTKEIKECQTRLNKRWEAFKAMVEDKK
RRVDSAVSLHNYGLECDETETWIKEKTRVIESTQDLGNDLAAVMTIQRKLFGMERDLAAI
EAKLTFLNEEANQLAQDHPENAANILARRAELDTAWDRLRKTLKDREDSLGEVSKLQTFL
QDMDDFQSWLFKTQKAVASEEMPTSLQEAEELLSRHNAVREDINNHEEDYHRVRDTGAQV
TQGQEDDPQYQQLEQRLNGLDRGWYELQKMWDSRRNFLDQGLGFQQFLRDGKAVEAILNN
QEYTLAHIDKPDTLAGAEKALKKHEDFVSTMEANEDKIDGALQGGQRLVDSNNLYSPKVQ
EKMDLVQDRQSKNKRRAVDVSEKLRDNRDLQHFLQNTQDLTVWINEKMLTAQDTSYDEAR
NLHSKWLKHQAFMAELASNKDWLNKVDQEGQELMESKPEFEPIVKERLAQLHELWDKLES
TTQEKDRLLFDANRSELFDQSLADMKKWLAELQQQLQSGDEDVKDLTNANIQLKKHQMTE
NQVRDRARELDELQEAVRKHGGAREDQPELEAEQQAMQSEFQQLLTPLSQRRGKLEAAKA
VHQFYRDLADELLWIEERMPLAMSQEHGNNLQTVQMLLKKNQTLQREIEGHQPCVGEVLE
RGRRMAAAASAEDRPEAERIGDQMQELEEAWARLRDEMAKRRERLSGSNLAQQYYNDADE
AEAWIGEQELYMIADEKAKDEQSAMLMLKRHLILKQAVDDYAASIQKLSDRAQKTLAEDH
PDGEEIIRRQGQVDKQYAGLKELAEDRRKKLNHTYHHFLLSREVEDLEHWIAEKDVVASS
QEMGQDLDHVTLLRDKFRDFSRDMGMIGQDRVDMVNQTIDELIETGHSEAATLAEWKDGI
NESWADLLELIDTRSQLLMASYDLLKYFDDGKELVTQIHEKQKELPEDVGDDFSKAESFH
RMHAAFERDITALGKQVQQFQETALRLRAQYAGDKQDAIQAMETEVVEAWKGLLDASDGR
RAELVDTAEKFRFFSMVRDLMAWMESIIQQIETQEKPRDVSSVELLQKYHQGIRSEIETR
SAKFTDCIDLGKSMLTRKHRDSAEIKEKLVQLMEKRQEMMFKWDDRWDWLRLLLEVCQFA
RDASVAEAWLIAQEPYVTSRDLGQSVDEVEKLLKRHEAFEKSTATWEERFSALERLTTLE
LLEVRKQQQEIEQFIKDEQRSDKESRREDTGFVEESSQLYTIEEQTLSGAMEPSSGQLDG
TAGDSTMPMVSEMRESASLELEPSVSVVTPREPERAATMPLETQRSQAVLQEGMLCRKYD
VEGSGKKASNRSWNNLYCVLKPGQLSAYKDAKSFGHGLTFHGEDPLPLSNATWESLTNYK
KKKNVAKLRLADGSEYLFQCKDEEELQRWSQAMEKAVQTLAAEETPGPSGSKTHSLPTAP
SSSAALPEPGSAKKDKEKKFSRFAKKK
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccgtgcctgctgcgtactgcccccataagccaaccccggctaagagaggtc
aagatcagcctaaaggccagcagcagggatgctggagccgtccggagcagcaaggagacc
gcaagccgaccctttactccagctgagaaggaggcccaggtccgggtcggagtgagcagc
agcagccggagcaggagcaccccgccggttcatcgcaccctcagacccgagagcaggaag
gcaacaagcaagcagcaggtaccggagcagcaccccgagaggaatggcaccttcctccac
atcccacctacctcggtgcctacggggctctcccccttctcctcatcatcgtcctcatcc
tcctcctgcaccccccggcgtccacggccctctcaaactcacccggacctggcccccatc
ctctcctcctcctcctcttcctcatcagccaggagcatgaagcgggcgcgctggcttagt
tacagcacctccaacatctgcttcaactccatcctggatggacgcttcaggcaactgcaa
gatgagcgcgaggcagttcaaaagaagacctttactaaatgggtcaactcgatcctttcc
cgagttggctgtcgcatctctgacctctacctggaccttcgtgacggacgcatgctaatt
aaactgctagaggtcctgtctggagaacgtctgccgaagcccactaaaggtcggatgcgt
atccactgtttggaaaatgtagacaaggccttgcagtttctcaaagagcagagggtacac
ctagagaacatggggtcccatgacattgtcgacggcaaccaccgcctcatacttgggctc
atttggaccatcatcctgcgtttccagatccaggacattattgtggaaacaggccaggca
gaccagaaggagacacactcagctaaagatgctcttcttctgtggtgtcagatgaaaact
gcgggatacccgaacgtcaacatcacaaacttcaccaatagctggaaagacggaatggcc
ttcaacgccctcatacacaaacaccggcctgatctggtggactataccaaactgaagagg
tccaatcccacccacaacctccagaacgcctttaatgtggcagaacagaaacttggcgta
accaaactgttagacccagaagatgtgttcacagagaacccagatgaaaaatccatcatc
acgtacgttgtggcgttttaccactacttctctaagatgaagcagcttgctgtcgaggga
aagagagttggaaaggttctggatcaagctatagagacggagaggatgatcgataagtac
gagacgctggcttcagacttgctgacatggatcgagcagaccatcgtcgtgctaaacaac
aggaagcttgccaattctctgacaggagtccagcagcagcttcaggccttcaacacgtac
cggactgtggagaaaccgcccaagttccaggagaaagggaatctggaggtgctgctcttc
accattcagagtcgcatgagggccaacaaccagagggtctacatgccgaaagagggagct
ttggtgtcagacatcaacagggcctgggagcgtctggaaagggcggagcatgagcgggaa
cgggtcctgagggacgagctgatccggcaggagaagctggaacagatggcgcgaagattc
gacaggaaggcagccatgagggaaacgtggctcctggagaaccaaagactagtggctcag
gataactttggttacgacctgccagccgtggaagcagctaaaaagaagcacgacgccatc
gagacagacatcgccgcatacgaggagcgcgttcaggcgctggtgaacatctccaaggag
ctggagtctgagcgttaccacgacgccaagcggatcgacgtgcgaaaagacaacatcctg
cgactgtgggactacttgcaagagctgctgaggtcccgcagagggcgtctggatatgaac
ctcaccctgcaaaggatcttccaggagatgctctacatcatcagctggatggatgaaatg
aaggcacgactgctctctcctgactttgggaaacacttgttagaggtggaggacttgctt
caaaaacacgctctgctagagaacgacatcgccctgcaggcagagagggtacagagtgcc
agtgctgctgctctgaagtttgcaaacggagatagctataagccatgtgatcctcaagtg
attcgagacagggtgcagcacctcaacctttgctaccaggagctttgcaccctggccgca
cagaggagagctcggctggagcagtcccgccgcttctggaactgcctgtgggaggtggcg
gagctggagagctggattagagagaaagagcagcttttctcctctctggattacggcaag
gacctgacgagcatgctggtgctccagagcaagcacagtgccttcgaggacgagcttgga
gctcgtcgcaacaacctgcagcaggtcttggctgaaggggataagatgatccaggccaag
cactttggctctccaaagatccaggagtgcatggatgacatcaggaggcagtggcagcag
ctggaggacctggctgcatttcgaaagcagaaccttcgggacacccagacattcttccag
tttcagggtgatgctgacgaacttaaagcctggctgctggatgccaagaggcagatgagc
agcaatgacgttggtcacgatgagtacacaactcagcgactactgaaaaaccagaacaac
ttgagaaacgaagccatcaagaatggagccaccattgatgcgctgtccaaacaggccagc
gctctgccagaggagctacaaaacacccctgacattcagagacgtctaaaagacatcaag
gacctttacatggagctcctgactctggctgacctgaggcagaagaaactggatgacacc
atggctctgtacaccatcttcagtgagacggacgcttgtgagctctggatgagcatgaag
gagacatggctggtggatttagaggttcctgagaacctggaggatttggaagtggtacag
aacagattaagcgctctagctcaagaaatggtgaacgttcagtcaagagtagatgacgtc
aacaaagctgcaaaacagcttgaggagagcagacaccctcgcaccaaagagatcaaggaa
tgccagacacgactcaataagagatgggaagcattcaaggctatggtggaggacaagaaa
aggagagttgattctgctgttagtctacacaactatgggttggagtgtgacgagacagaa
acctggatcaaagaaaagacgcgggtgattgagtccacacaggatctgggcaatgacctg
gcagccgtcatgacaatccagaggaaactgtttggcatggagagagatttagcagctatt
gaggccaagctcaccttccttaacgaagaggcaaaccagctggcccaggaccacccggag
aacgcagcaaatatcttagcccgcagggcagagctcgacacggcctgggatagacttaga
aagaccctaaaggacagggaggactctctaggtgaggtcagtaagttacagactttcctg
caagacatggatgacttccagtcctggctattcaaaacccagaaagctgtggcatctgag
gagatgcccacctcactgcaggaggccgaagaattgctcagccgtcacaatgctgtgcga
gaagacataaacaaccatgaagaggactatcaccgtgtgagggacacaggagctcaggtc
acccaaggtcaggaagatgatcctcagtaccagcagctggagcagaggctaaatgggctg
gaccgtggctggtatgagctccagaagatgtgggacagtcgcagaaattttctggaccag
ggtttgggcttccagcagttcttgagggacggcaaagctgtagaggccatcctaaataat
caggagtacacgctggcccacatagacaagcctgacacgttggcaggggcagaaaaggct
ttgaagaagcacgaagacttcgtcagcacaatggaagccaacgaagataagattgatggg
gccctgcagggtggacagcgattggtggacagcaacaacttgtactctcccaaagtccag
gagaaaatggacttagtccaggacaggcaaagcaagaataagagacgagctgtggatgtt
tctgaaaagctgagagataaccgtgaccttcagcactttctgcaaaacactcaagatctg
actgtgtggatcaatgaaaagatgctgacagctcaggatacctcatatgacgaggccaga
aacctgcacagcaagtggctcaaacatcaggctttcatggcggagctggcctccaataag
gactggctcaataaagtagatcaggagggtcaggagctcatggaatccaagcctgagttt
gagcccattgtgaaggagcgcctggcccagcttcatgagctctgggacaagctggagtcc
acaactcaggagaaggaccggctgttgtttgatgccaatcgctcagagcttttcgaccag
agcctggctgatatgaagaagtggctggccgagcttcagcagcaattgcagagcggagat
gaggatgtaaaagatctcacaaatgccaatattcagctgaaaaagcaccagatgacggag
aaccaagttcgtgaccgggcgcgggagctggacgagctccaggaggctgtcaggaagcac
ggaggagccagggaggaccagccggagctggaggccgagcagcaagccatgcagagcgag
ttccagcagctcctcacgccgctgtcccagcgccgaggcaagctggaggctgccaaagct
gtccatcagttctacagagacctggctgatgagcttctctggattgaggagaggatgccc
ctggcaatgtcacaggagcacggcaacaatcttcaaactgtgcagatgctgttaaaaaag
aaccagacgctgcagagggagatcgagggccaccagccttgtgtcggcgaagtgctggag
cgaggcagacggatggcggctgcagccagcgcggaggacaggccggaggcggagcgaatc
ggggaccagatgcaggagctggaggaggcgtgggcccggctgcgggacgagatggccaaa
cggcgagagaggctgagcggctccaacttggcccagcagtattacaacgatgctgatgag
gccgaggcctggataggagagcaggagctctatatgattgcggatgaaaaggcgaaggat
gagcagagtgccatgctgatgctgaagcgccacctgatcctgaaacaggcagtagacgac
tacgctgcctccattcagaagctttccgatcgtgcgcagaagacgcttgcagaggaccat
cccgacggggaggagatcataaggcggcagggtcaggtagataagcagtacgcaggcctg
aaggagctggcagaggaccgcaggaagaaactgaaccacacctaccatcacttcctgctg
agcagagaggtggaggacctggaacactggattgcagagaaagacgttgtggcgtcctcg
caggagatgggacaggacctggaccacgtcacgcttctgagggataaattcagagacttt
tcgcgggacatggggatgataggtcaggatcgggtggacatggtcaaccagaccatagat
gagctgattgaaacgggccacagcgaggcggccaccctggcagagtggaaggacggcata
aacgagagctgggccgatctcctggagctcatcgacactcgatctcagctcctcatggcg
tcttacgatctcctcaagtactttgatgatggaaaggagttggtgacgcagattcacgag
aagcagaaagagctgccagaggacgtgggagacgatttcagcaaagccgagtccttccac
aggatgcacgccgcttttgagagagacatcaccgccctgggcaaacaggtgcaacagttc
caggagacagccttgagacttcgagctcagtatgcaggggacaaacaggacgccatccag
gccatggagacggaggtcgtagaagcctggaaaggcctgctggacgcctctgacggccgg
cgggcggagctggtggacacggccgagaagttccgcttcttcagcatggtgcgagacctg
atggcctggatggagagcatcatccagcagatagagacccaggagaaacccagggatgtc
tcctccgtggagctgctgcagaagtaccaccaggggatccgatcagaaattgaaaccagg
agcgccaagttcacggactgcatagacctcggcaagtccatgctgacacgcaagcaccga
gactctgctgaaatcaaagagaagctggttcagctgatggagaaaagacaggaaatgatg
ttcaaatgggatgacagatgggactggctccgactcttgctggaggtgtgtcaatttgca
cgagacgcttcggtggcagaggcctggctcatcgctcaggagccctatgtgaccagcagg
gacctgggccagagcgtggacgaggtcgagaaactcctcaagaggcacgaagcctttgag
aaatccactgccacatgggaggaacgcttctcggcactggagcgcctcactacgttggag
ttgctggaagtgaggaagcagcaacaggagattgagcaattcattaaagacgagcagcgc
tcagataaagaaagcaggagagaagacacaggcttcgtagaagaatcttcacaactctac
actattgaggaacaaaccctgtctggtgcgatggagcccagctcaggtcagctggatgga
actgctggtgactccacgatgccgatggtgtcagaaatgagagagagcgcctctctggag
ctggagccctctgtctcagttgtgactcccagagaacctgagagggcggccaccatgccc
ttagagacccagaggtcgcaggcagtgctgcaggagggcatgctctgccgcaaatatgac
gtggaaggctccggaaagaaggcttctaacaggtcctggaacaacttgtactgcgtactg
aagccgggtcagctctcagcatacaaagacgccaaaagctttggtcatggactgacgttt
cacggtgaggaccccctacccctcagcaacgccacctgggagagcctcaccaactataag
aaaaagaagaatgtagccaagctgcgtcttgcagatggaagcgagtatctgttccagtgt
aaagacgaggaggagctccagcgctggagccaggccatggagaaggccgttcagacgctg
gcagcggaggagaccccgggcccctcggggtccaaaacccacagcctacccaccgctccc
tcctcctcagctgccctgcctgagcccggctctgccaagaaagacaaggagaagaagttc
agccgctttgccaagaagaagtga
DBGET
integrated database retrieval system
