Xiphophorus couchianus (Monterrey platyfish): 114133893
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Entry
114133893 CDS
T05908
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114133893 (usb1)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
114133893 (usb1)
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GFIT
Motif
Pfam:
HVSL
2_5_RNA_ligase2
TilS_C
Motif
Other DBs
NCBI-GeneID:
114133893
NCBI-ProteinID:
XP_027855836
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Position
2:complement(22121011..22125759)
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AA seq
292 aa
AA seq
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MLVGYSSSSEEDSEPGSEARSRNSRRSVEEDEGTRDLPTKKKARTEELDPKTSLIISGEN
KTCMSCRLPLPGCLLSMFPDDDDEALTEDSSLHGGRIRSFKHERGNWATYVYLPYLPEEE
FEELLQELLSALGAHGLMLTQQEEFHLSLSQTVVLRHHWIQPFTQSLQSGLSQCGRFACS
AATLKVYCNAERTRTFLGMEVSTSHAQLLDLVRVVDKTMTEFQLDTFYKEPSFHVSLAWC
VGDQTEKMKELLQELQIMVDNREEGPFLLRLDCVEVRCRTGNKTFRFSLKTS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgttggttggttacagcagcagctctgaggaggacagtgaacccggaagtgaagcgagg
agtcgaaatagccgaagatcagtggaggaagatgagggaacccgagaccttccaaccaag
aagaaagccagaaccgaggagctggatcctaaaacgagtctgattatttcaggtgaaaat
aaaacgtgcatgtcctgcagactgcctctgcccggttgcctcctgagcatgttccctgat
gacgacgatgaagcactgactgaagacagctcccttcatggtggacgcatccgctccttc
aagcacgagagaggaaattgggctacttatgtttatctgccttaccttcctgaggaggaa
tttgaggagcttttacaggagttgctgtcagccttgggggctcatggtctgatgctgacg
cagcaggaggagttccacctgagtctgtctcagacggtggtgctcaggcaccactggatc
cagccatttacacaaagcctccagtcgggcctttctcaatgcggaaggtttgcgtgttca
gcagcaacgctgaaggtctactgcaacgctgagaggacaaggaccttcttggggatggaa
gtgtccaccagtcatgctcagttgttggatctggtccgagttgtcgacaaaacaatgacc
gagtttcaattggacactttttataaggaaccatctttccatgtgagtctggcctggtgt
gtgggagaccagacggagaagatgaaggaactcttacaggagctgcagattatggtagat
aatcgtgaagaagggccgtttctgttgaggttggactgtgtagaagttcgctgcaggaca
ggaaacaagacttttcgtttctcactaaagacctcgtga
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