Xiphophorus couchianus (Monterrey platyfish): 114133894
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Entry
114133894 CDS
T05908
Symbol
stag1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114133894 (stag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114133894 (stag1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114133894 (stag1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
114133894
NCBI-ProteinID:
XP_027855837
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Position
19:complement(6461339..6504524)
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AA seq
1260 aa
AA seq
DB search
MITSELPVLQDSSNESGATDTVSLSINMPEMEDPEMKGKKKRGRPGKQTQTSNKKPRKSP
TDKTLSMTRGRGKANGVAQQNGNGGEPVTLFEVVKLGKSAMQSVVDEWIEAYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPMWKKFRYN
FCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEELLSDRQESALIELTVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADAEKVANLLQIPQ
FFDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSVEELLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
QLLKAGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGVPSKDDLLALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLITGGREGLQPLVFNPDGTLQNELLNFVLDHV
FIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGSEFPPINLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKTGSVRSK
KGRPPLHKKRIEEESSVEGSWMMRNDTLQTPSALQTPQLTSTVLRENRPAEHMPDPDSEP
GSENDYVHNPQIQMSWLGQQKMEEVNRKDRTSMNYIKSRSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagcttcctgtcctacaggactcctctaatgagtctggggcgacggat
actgtgagcttaagcataaacatgcctgagatggaagacccagagatgaaaggcaagaag
aagagaggaaggcctggaaaacagacacagacgtccaataagaagccccggaagtctccg
acagacaagacactgagcatgaccagagggagggggaaagcaaacggcgtggctcaacag
aacggaaacggaggggagcccgtcaccctgtttgaagtcgtcaaactgggaaagagtgca
atgcagtctgtggttgatgagtggattgaagcatacaagcaggacagagacttggctctg
ctggatctcatcaactttttcatccagtgctcagggtgcaaaggcactgttaggatagag
atgttcaggaacatgcagaatgcggagatcatccgtaagatgacagaggagtttgatgag
gacagtggggattatcctctaactatgcccggccctatgtggaaaaagtttcgctacaac
ttctgcgagttcatcggcgttttgatccgccagtgtcagtacagcatcatctatgacgag
tacatgatggacacagtcatttcgctcctcaccggactgtcggactcccaagtgcgagcc
ttcagacacacatccacactagcagcgatgaagctgatgacggcgctagtcaatgttgcg
ttgaacctgagcatccatcaggacaacactcagagacaatatgaggcagagaggaacaag
atagccggcaaacgagccaatgagaagctggaactgctgctacagaagaggaaggagctt
caggaaaatcaagatgaaatagaaaatatgatgaactccatctttaaaggcatcttcgtg
catcgctacagggatgctatcgctgagattcgagccatttgcattgaggagatcggggtg
tggatgaagatgtacagtgatgcgtttctcaatgatagctacttaaaatacgttggctgg
acactacatgaccggcaaggagaagtgcgtctgaaatgcctgaaggctctgcagaacctt
tacacaaacagagagctattccccaagctagagctcttcaccaaccgcttcaaggaccgg
attgtgtcgatgacactggataaggagtacgacgtggctgtagaggccattagactggtc
acactcattctgcagggcagtgaagacgctttgtcaaacgaggactgcgagaacgtgtac
cacctggtttactctgctcaccgacccgttgcagttgctgcaggagagttccttcacaga
aagttgttcagtcgccatgacccacaggctgaagaagctctggctaagcggagagggagg
agcagtcccaatgggaatctcatccggatgctggttctcttcttcttggagagcgagctt
catgaacatgcagcgtacctggttgactcgctgtgggaaagttctcaggagttgctgaaa
gactgggaatgcatgactgaacttctactggaggagcccgttcagggagaagagttgttg
tcagacagacaggagagtgcgttgatagagctgactgtgtgcaccatccgacaggcggcc
gaggcacacccacctgttggcagaggcactggcaaacgagtactgacagcgaaagaaaga
aagacccaaatagatgacaagaacaaactcactgaacacttcatcatggcccttccaatg
ctgttatccaagtaccaggcagatgcagaaaaagtggccaacctgctgcagatcccacag
ttctttgacctggacgtttacagcgccgggcgcatggagaagcacctggacgccttgctg
aagcagatccggttggtggtggagaaacacatcgagacggacgtcctggaggcctgcagc
aaaacctacagcatcctctgctccgaggagtacaccatcatgaatcgcgtggacatcgcc
cgctcgcagctcatcgacgagatgaccgaccgctttgcacactctgtggaagagctgctg
caggagggcgaagaggctgacgatgacgacatctacaacgttctgtcaactctgaaacga
cttacggctttccacaacgctcacgatctaacaaggtgggatttgttcgggaattgctac
cagctgctgaaggcgggcatcgagcagggctccatgccggagcagattgctgtgcaggcc
ctgcagtgctctcactactccatcctgtggcagctggtgaagatcaccgagggggtcccc
agcaaggacgacctcttggctctcaggagagtggtgaagtcttttctcgccgtctgccag
cagtgtctctccaacgtcaacacgccggttaaagaacaggcgttcatgcttctttgcgac
ctgctgatgatcttcagccaccagctgatcaccgggggcagagagggcctccagccgctg
gtattcaacccagacgggaccctgcaaaacgagctgctgaactttgtcctggatcacgtc
tttattgaccaggacgacgagaaccagagcatggagggagacgaggaggacgaggccaac
aagatcgaggcgctccataagaggaggaatttgcttgcggctttctgcaaactcatcatc
tatgacatcgtggacatgcctgctgctgctgacatctttaaacactacatgaagtactac
aacgattacggagacatcatcaaggaaacactcagcaaaaccagacagacggataagatt
ctctgcgctaagacactcatactcagtctgcagcagctgttcaacgagcttctgcaggat
cagggtcccaatctggatcggacgtcgtctcacgtgagcggcattaaggagctggcccgc
cgctttgctctgaccttcggcctggatcagatcaagaccagagaggctgtcgcaacgctg
cataaggatggaatagagtttgcatttaagtatcaaaatcctcgaggatcagagtttcca
ccaatcaacctggccttcttggaggtcctgagtgaattctcctccaagctaatacgacaa
gacaaaaagacagtgcactcctacctggaaaagttcatgtcggagtcgatgtcggagcgt
cgagaggacgtgtggctgccgcttatctcctacaggaacagcctgctgacgggcggcgac
gaggaccacatgtccgtcacgtcgggctccagcagcaagaccggctcggtgcggagcaag
aagggacgaccgccgctgcacaagaagcgcatagaggaggagagcagcgtggagggatcg
tggatgatgagaaacgacacgctccagacgccgagtgcgctccagactcctcagctcacc
tcgaccgtcctcagagagaacagacccgcagaacatatgcctgatccagactcggaacca
ggatcggagaacgactacgtccacaatcctcagatacagatgtcgtggctcggccagcag
aagatggaggaggtgaacagaaaagaccgaacgagcatgaactacatcaagtcgcgcagc
aatcagggcgtccggcagactgtccgcgggctgatggaggacgacgcagagcccatcttt
gaagacgtgatgatgtcatcgcggggccagctggaggacatgaacgaggagtttgaagac
accatggtgatcgacctgccgccgtcaaggaacagacgtgaaagagcagaattgagacca
gacttctttgactctgcagcaatgatagaagatgagtcgggattcagcatgcccatgttc
tga
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