Xiphophorus couchianus (Monterrey platyfish): 114134033
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Entry
114134033 CDS
T05908
Symbol
rtn1
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114134033 (rtn1)
03036 Chromosome and associated proteins [BR:
xco03036
]
114134033 (rtn1)
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
114134033 (rtn1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114134033 (rtn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
114134033
NCBI-ProteinID:
XP_027856049
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Position
19:complement(18726288..18756659)
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AA seq
695 aa
AA seq
DB search
MSAAQPGEELGSDGRWFGDDSEPNGLFGNTAVRFGEPRGGVDATADLDHQQFHPFQEDGK
RPSVAMETASTGDPMSGLFRKPMNDDGDVYTSLMSNQASYLPDDLKPSNALGDFTGDAYS
FTSKTKTASNLPDDTPKSLLGSDKTESYNYMDISHGEERQGSRASADLDLVGRYIDNNPE
GDEEDEEEENLGPALGSHSFPYVEDPSDEELNDYRSYRNLGGTPQTASPVKITLTGSSKA
EPQQLPPSVGVSERENVLSVGQQGVPTVTLSEPEDDSPASTPNASPTRKQFSSDDMFKVE
SGKPAASRNNAGPKPRSRDHEGSSAESGDSEIELVSEEPPKPRSNPFTEAPKNKATSNPF
DNAPVAKAGPGLAAGPAAYSILREEREAELDSDLIIESASEESPKREQGIGGPKQGAPSP
SPLVYAASPPSSHPEVAPVQPPAAEKAKSPVRAEEDPPSKPKPPTATVPPEVRSEKPQPG
DMPPQQDKGELGKAAVAALLQGFSKQKAIDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVV
SVGAYLALAALSASISFRIYKSVLQAVQKTDEGHPFKAYLEMEIALSQDQISKYADKILL
YSNTCMKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLILAVVSMFTLPVVYEK
HQAQIDQYVGLIRTQVNSVVGKIQAKIPGAKRKEE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgctcagcccggcgaggagctcggctcggacgggaggtggttcggggacgac
agtgagccgaacggcctgttcggaaacacggcggtcaggttcggggagccgagaggcggc
gtcgacgcgacggccgacctggatcaccaacaatttcatcctttccaggaggacgggaaa
aggccttccgttgctatggaaactgcatctacaggtgatcccatgtctggcctgtttagg
aaacccatgaatgacgacggcgacgtgtacacctcgctgatgtccaatcaggcctcctac
ctaccggacgacctgaagccctccaacgccctgggcgacttcaccggcgacgcctacagc
ttcacctccaaaaccaaaaccgcttccaatttacccgatgacaccccgaagtccctgctg
ggctccgacaagacggaatcctacaactacatggatatcagccatggggaggagcgccaa
ggcagccgggcctccgctgatctcgacctggtggggaggtacatcgataacaaccccgaa
ggagacgaggaagatgaggaggaggagaacctgggtccggcgctcggctcccactccttc
ccctacgtggaggatccgtccgatgaggagctgaacgactaccgctcctaccggaacctg
ggcggcaccccgcagacggccagcccggtgaagatcaccctgaccgggtcgtctaaagcc
gagccgcagcagctgcccccgtcggtcggtgtgtcggagcgtgaaaacgtcctgagcgtg
ggtcagcagggcgttcccacggtaaccctgtctgagccagaggacgacagccccgcctcc
acgcccaacgcttcaccaacaaggaaacagttttcatctgatgacatgttcaaggttgaa
tccggaaagcctgcagcttccagaaacaatgcgggcccaaaacccaggagccgggatcac
gagggcagcagcgccgagtccggagactcggagatcgagctggtctccgaagagcctccc
aagccgcgcagcaacccatttactgaggcgccgaagaacaaggcgaccagcaaccccttc
gacaacgccccggtggccaaggccgggccgggcctcgctgccgggcctgcagcctacagc
atcctgagggaggagcgggaagcagagctcgacagcgacctcatcatcgagtccgcctcc
gaggaaagccccaagagagagcagggcatcggcggtcccaagcagggagccccctctccg
tcccctctggtctacgccgccagccctcccagcagtcaccctgaggtggcgccggtccag
ccgccggccgccgaaaaggccaagagccccgtcagagcagaggaggatcctcccagcaag
ccgaagcctccgaccgccactgtgcctccggaggtgagatcagaaaagccccagccgggc
gacatgccgccccagcaggacaaaggagagctggggaaagctgctgtcgccgcgctgctg
cagggattcagcaagcagaaagccatcgacctcctctactggaggaacgtgaagcagtcc
ggcgccgtgttcagcagcgtcctgctgctcctgttctccctgacccagttcagcgtggtc
agtgtcggagcctacctggctctggcggcgctctccgcctccatcagcttcaggatctac
aagtctgtgctacaggctgtgcagaagaccgatgaggggcatccgttcaaggcttatctg
gagatggagatcgctctgtctcaggaccagatcagtaagtacgccgataagatcctgctg
tacagcaacacctgcatgaaggagctccgcaggctgttcctcgttcaggatctggtggat
tctttgaagtttgcagttctgatgtggctgctgacctatgtgggtgcactcttcaatggc
ctgacactgctcatcctggctgtggtgtccatgttcactttgcctgtggtttatgaaaaa
catcaggcgcagattgatcaatacgtgggattaatacggacccaggtcaactctgtggtg
gggaagatccaggcgaagatccccggggccaagaggaaggaggagtaa
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