Xiphophorus couchianus (Monterrey platyfish): 114134069
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Entry
114134069 CDS
T05908
Name
(RefSeq) T-box transcription factor TBX6-like
KO
K10180
T-box protein 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114134069
03019 Messenger RNA biogenesis [BR:
xco03019
]
114134069
Transcription factors [BR:
xco03000
]
Eukaryotic type
Other transcription factors
T-box
114134069
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
114134069
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T-box
Motif
Other DBs
NCBI-GeneID:
114134069
NCBI-ProteinID:
XP_027856123
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All DBs
Position
2:615837..622634
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AA seq
611 aa
AA seq
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MATIKQNILSSRVKIQMFRRTEKLVDESFILYPLTKTDEFCFADREAPARLPPFPPVCDV
APRLLGARESSYKRQKDDVKMELENSSLWKQFSSVGTEMIITKKGRRLFPGLRLKLSGLN
PSLRYILLLDVVPADNSRYRFQGGGWQAVSGAEARLPDRVFIHPDSPATGAHWQSRTISF
HYAKLTNNTLDAQGHIILHSLHRYQPRVHVVEARDMLRWGGGQHCFVFPETQFITVTAYQ
NNKITELKINSNPFAKGFREDGMNSKKQRDARQKRKMVALTETLDIVNCDPCEAVEAAEP
APSSSDLQALALASLPPLPDSSCGFRPEEASYPVQEPALDLTQTFMTSQMSDISVTMQET
QENVAAHNMIENSEVMAEANFDPSFSAAPSHPHPSFPPVDYPSSSFSFPTPPPSDASSSP
ANSAFIPETISPHTPADFTCPSNPQTSPPSQVRQGEPDANASNGRLAHTSAAFTYPNILP
MNAEPEYSLATLPANGSCSTFALPSLPQQIQTLSFPNVTPSAALNFPNLTHQAQFATAPY
RPEVVLHRQAFIPQPTSTPAPALYPAFPSYPLHLHQDPHSALSAPFRHLYRQHQQSHPRS
QGSYISTRAVF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctaccataaaacagaacatattatcatccagagtaaaaattcaaatgtttagaaga
actgagaagctggttgatgagtcatttatcttgtatccactcactaaaactgacgagttt
tgttttgcagacagagaagcccctgcacgtttacctccatttcctcctgtttgcgacgtg
gcgccgaggcttctgggcgccagggagtcgtcctacaaacgccaaaaagacgacgtgaag
atggagttggagaactcgtcgttgtggaagcagttcagctccgtgggaaccgagatgatc
atcaccaagaagggcaggcggttgttcccgggcctgagactaaaactgtccggtttgaat
ccgtctctccgctacatcctcctgctggacgtcgtcccggcagataactcccgctaccgc
ttccaaggcggcggctggcaggccgtcagcggggcagaggccaggctgcccgaccgggtc
ttcatccacccggactcgcccgccaccggtgcccactggcagagccgcaccatctccttt
cattacgccaagctcaccaacaacaccctggatgcacagggacatataatcctgcactcg
ctgcatcgctaccagcccagagtccatgtggtcgaagccagagacatgttacggtggggc
ggaggacagcactgcttcgttttccccgagacccagtttatcacagtcacagcttaccag
aacaacaagatcacagagctgaagatcaattccaacccttttgctaaaggttttcgagag
gatggcatgaacagcaaaaagcaaagagacgcaagacagaaacgcaagatggtcgctcta
acggagactctggatattgtgaactgtgatccctgtgaagccgttgaagctgctgaaccc
gcaccctccagctcggacctgcaggctctggcgctcgcctctctccctccgctgcccgac
tcttcctgcgggttcagacccgaggaagcgtcctatcccgtccaagagcctgcactggac
ctcacccagaccttcatgacctcccagatgtcagatatcagcgtcacgatgcaggaaacg
caggaaaacgtagcggcacacaatatgattgaaaactcagaagttatggctgaagcgaac
tttgaccctagcttctctgctgctccatcccatcctcacccatccttccctccggtggat
tacccttccagctccttcagtttccccacacctccaccttcagacgcctcttcctccccc
gctaatagcgccttcatcccggaaacaatcagcccccacactccagctgatttcacctgt
ccgtcaaacccacaaacatctcctccctctcaggtgcggcagggggaaccggatgctaat
gcaagtaatggacgtttagctcacacttcggcggcttttacttatccaaatatcctccct
atgaatgcagaacctgaatattctttagctactttacctgccaatggttcctgcagcact
tttgcgttgccgtcgcttccccagcaaattcaaactctgtcatttccaaacgtaactccg
agcgctgctttgaatttccccaacttgacccaccaagctcagttcgcgactgccccctat
cgcccggaggtggtactgcaccgacaggcttttattcctcagccgacctccacgcctgcg
ccagctctgtaccctgccttcccatcataccctctccacctgcatcaggacccccactcc
gctctctctgcacccttcaggcatctttacagacagcaccagcagagccaccctcgctcc
caggggtcctacatcagcacaagagcagtgttttag
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