Xiphophorus couchianus (Monterrey platyfish): 114134091
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Entry
114134091 CDS
T05908
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
114134091
NCBI-ProteinID:
XP_027856186
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Position
19:complement(7846403..7850793)
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AA seq
647 aa
AA seq
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MDLRVASILLLIVASAAATGKGYVVKKVVPMNVKSHVVSVAGEPGPPGEPGPEGPQGPPG
SPGQDGVGYSGPQGPPGPPGQPGRSIAGKPGTPGGPGKPGIPGAPGERGDTGATGLQGPR
GVPGSPGSPGPAGLSATGKPGPSGLPGAMGPRGEPGLKGHPGVPGLPGAKGDRGIGAPGP
QGETGPQGPMGPTGATGAPGIGRPGKPGTNGEPGKSGSPGRDGSSGPMGPQGPKGHTGAP
GIGLPGKSGENGAPGLPGPAGPKGHQGPAGAPGAPGVPGYGKPGANGEKGERGASGSPGA
TGPKGEQGPTGYTGATGATGSMGPVGPQGERGFPGATGPTGLKGDTGPSGPQGPKGHKGD
QGAQGFQGKQGYPGAAGPPGPRGATGPAGDKGDGGAPGTPGAPGIPGPAGPKGHTGRPGE
PGASGSDGSPGQRGPAGPQGPSGATGPKGHPGLPGPPGPAGLAAKGVSGPQGPAGQPGEP
GADGEPGPAGPPGPPGPPGEVVFEKGMGLSEVMVKSSVSAFTAVLATPYPAAGTPIKFDQ
IVYNAENHYDPESGIFTCHVPGIYYFSYSIHVNGAHALVALYKNGQPIMFTYDEYNKGFL
DQMSGSAVLLLDEHDTVYVQIPDEEANGVFAAENVHCSFSGFLIAST
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacctacgagtggcaagcatcctccttctcattgtggcctctgcagcagccactgga
aagggctacgtggtgaagaaagtggtgcccatgaatgttaagagccacgtggtatcagtg
gcaggtgagcctggtcctccaggtgagcctggccccgagggacctcaaggcccacctggc
tccccaggtcaggatggcgtaggttattctggacctcaagggccccctggacctcccgga
caacctggccgctccatcgctggcaaacctggaactccaggtggacctggcaaacccggc
atccctggagcacctggtgagaggggagacaccggagccactggccttcagggaccaagg
ggagttcctggttctcctggaagccctggacctgctggtctgtctgcaactggcaaacca
ggaccttctggccttcctggagcaatgggaccaagaggagagcctggcttgaaaggacat
ccaggtgttcctggacttcctggggctaagggtgatagagggattggagctcctggacct
caaggtgaaaccggacctcagggacctatgggtccaactggagcaaccggtgcaccagga
atcggaaggccaggcaaaccaggtaccaatggtgagccaggaaagtcaggtagcccaggt
agagatggttcttctggccccatgggaccacagggacccaagggacacactggtgcccca
ggtataggtcttccaggtaaatcaggtgagaatggtgcccccggtttgcctggtcctgct
gggcctaagggtcatcagggaccggctggagctcctggtgcccctggagttccaggatac
ggaaagccaggtgcaaatggtgagaagggagagagaggagcctcaggtagcccaggtgcc
acaggtccaaagggagagcagggcccaacaggttatactggggctactggtgccactggc
tcaatgggtccagttggacctcaaggtgaaagaggtttccctggagccactggccccact
ggtcttaaaggtgacacaggtccatctggacctcagggacctaagggacacaagggagat
cagggagcacagggtttccaaggcaagcagggttatccaggggcagctggtcctcctgga
cccagaggggccactggacctgcaggtgacaaaggtgatggtggtgctccaggtacccca
ggtgctccaggtatcccagggcctgctggacccaaaggacacactggtcgccctggtgag
ccaggtgcctctggatctgatggatctcctggtcaaagaggacctgctggaccacaagga
ccttctggtgctactggccctaaaggacacccaggtctccctggacctcctggtcctgct
ggtttggctgcaaagggtgtttctggacctcagggtcccgctggtcaacccggtgagccc
ggagctgatggagagcccggccccgctggccctcctggtccccctggacctcctggtgag
gttgtcttcgagaagggcatgggactgagtgaggttatggtcaagtcctccgtgtctgca
ttcactgcagttctggccactccctaccctgctgctggcactcccatcaagtttgaccag
attgtttacaatgctgagaatcactatgaccctgagtcaggcatcttcacctgccatgtt
cctggaatttactacttctcctacagcatccatgtcaatggagctcatgccctggtggct
ctgtacaagaatggccagccaattatgttcacttatgatgagtataacaagggtttcctg
gaccagatgtctggtagcgctgtcctcttgctcgatgagcacgacacagtctacgtccag
atccctgatgaagaggccaatggtgtctttgctgcagagaatgtccactgctctttctct
ggattcctcattgcctcaacgtga
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