KEGG   Xiphophorus couchianus (Monterrey platyfish): 114134183
Entry
114134183         CDS       T05908                                 
Name
(RefSeq) la-related protein 1B-like isoform X1
  KO
K18757  la-related protein 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114134183
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114134183
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 114134183
NCBI-ProteinID: XP_027856379
LinkDB
Position
19:complement(1625788..1661894)
AA seq 1120 aa
MSTEVECSQVDSGLTASSSSGVQDNNQNKSEGAHLHKEQEEPGQRGTEKQQADDHKQEST
KSQADTHKKSKENDKENEQSGNADSAVEAAKKKVVEAPPPKVNPWTKRTTGRVPVNNINS
GSQETDQQNTLKVVRASKPRVRKPSKSSDFSDITNWPTPGELAKEASLIQQQQTVLGNNG
KKPSSRRERDKRRERPDRKSESSHDGGESKENQEAHVDPMEEPCKEEEPKPGQDSKSSSL
KKRGGEGNKRKWVSLPLEEVSRDDADKTSGGFPAQSDTSPISDSSDPMSPNQRVHDNRAH
YDSRSWRAEPRDHGDDTGSIRSDGGTGRGGIRGRGKGRGRGRGRGRGRYEYSLNYRDARS
SDGSGQVPTEFGTNMVYYYDDGNKVQMYTVDEKLLKEYIKRQIEYYFSNHNLERDFFLRR
KMDTQGFLPISLIASFHRVQALTTDVNLIIEALKSSTEVELVDERIRCKTEPERWPIPTP
PVVGSPRTDFSQLINCPEFVPRQNLNAVSAATLPVKEPLIGPADSSSSNQDSLPAADDSK
DGPASEAKPDPNPDAWIQVEKRHRQTSGKSKHDSDDVCAASPSPPLEPEPDLLSSAGEPK
IPPAPSSQPPSQAEPDQEELDFMFDEEMEQMAPRKNKFTDWSDEDDSDYELDDQDVNKIL
IVTQTPPYLRKHPGGDRTGNHESRAKITADLAKAINDGLYYYEQDLWKGEEQIECSKQDV
ENFKKLNVISKDEFDTLTPKVPIDPNQEVPPPPMTVETGSDLARSLPTTVPESPSTSQPR
TPRTPRTPGRQDPNKTPRFYPVMKESGAIDGQMPRKKKTRHSSNPPQEAHIGWVMDSREH
RPRSASISSSNASPSEGAPLSGSYGCTPQSLPKFWHPSHELLRDNGFTQQGYHKYRRRCL
NERKRLGVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFKQFALEDAKENYRYGLECLFRYY
SYGLEKRFRLDLFKDFQEETLKDFEKGQLYGLEKFWAFLKYSRIKNQPIDPKLQEHLSKF
RNLEDFRVVPPMGEEGGRRRYPSSSAGDEGRRRRHPSNSTSKPAQASKSSNVPPQSTAAS
SSASTQSSAKDSTQKSTAPSNHGKKPDSRAAKKDGVSPNK
NT seq 3363 nt   +upstreamnt  +downstreamnt
atgtccaccgaggttgagtgtagccaggttgactcgggtttgacagcgagcagctccagc
ggggtgcaggacaacaaccaaaacaagtcagagggggctcacctgcacaaagaacaagag
gagccggggcagaggggcacggagaagcagcaagcggacgaccacaagcaagagtcgacc
aagagccaagcggacacgcataagaaaagcaaagaaaacgataaagaaaacgaacagagc
ggcaacgctgactcggctgtcgaggcggcgaagaagaaagttgtagaagcccctccgccg
aaagtcaacccgtggactaaaagaaccaccggcagagtgccggtcaacaacatcaactcc
ggctcccaggagacagatcaacaaaacaccctgaaagtggtccgagccagcaagcccaga
gtgagaaaacccagcaagtccagtgacttcagtgatatcacaaactggcccacacctgga
gaactcgctaaagaggcgtctctgattcagcagcagcaaactgtccttggcaacaacggg
aagaagccttcctcccgcagagaaagggacaagagaagagagcgaccggacaggaaatca
gagagcagccatgatggaggggagagcaaggagaaccaggaagctcatgtggatccaatg
gaggaaccgtgtaaagaagaagaaccaaaaccaggacaggactcaaagagctccagcctg
aagaagagaggaggtgagggtaacaaacgtaagtgggtttctctgccgctggaggaagtt
tcccgggacgatgccgacaagacatccggcgggttcccagcccagtcagacacttcgccc
atcagcgactcgtccgaccccatgtcgcccaatcaaagggttcatgataacagagcgcat
tatgacagccggagttggagagccgagccgcgggaccacggagacgacaccggcagcatt
cggagcgacggagggactgggcgcggaggaatacgaggcagggggaaaggtcgcgggcgt
ggcagaggtcgcggacgaggtcggtacgaatactctctgaactacagagacgctcgctca
tctgacggctccggtcaggtgcccacagagttcggtaccaacatggtttactactacgac
gacggcaacaaggtccaaatgtatacagtggacgaaaagcttctcaaagaatacatcaag
cggcaaattgaatactacttcagcaaccacaacctggagcgggatttcttcctgaggaga
aaaatggacacgcagggcttcctccccatttcactcattgcgagcttccacagagtgcag
gctcttaccactgacgtcaacctcatcatagaggctctaaaaagcagcactgaagtggag
ctggtggatgagaggatacgctgtaaaacggagccggagcgctggcccatccccacgcca
cccgtcgtgggttctccccgcaccgacttctcccagctcatcaactgccccgagtttgtt
cctcgacagaacctgaacgccgtcagtgctgctacgttgcccgtgaaggagcctctgatt
ggcccggctgattccagctcgtccaatcaggactctctcccggccgcagacgactctaaa
gacggccctgcatccgaggccaagcccgaccccaacccggacgcctggatccaggtggag
aaacgccaccgtcagacctctggaaaatcaaagcatgacagcgatgatgtgtgtgctgct
agcccatctcctccgttagagcccgaacccgacctcctctcctctgcaggggaacccaag
atccctcctgctccgagcagccagccgccttcccaggccgaaccggaccaggaggagctg
gacttcatgttcgacgaggagatggagcagatggcgcccaggaagaacaaattcaccgac
tggtcggacgaggacgactcggactacgagcttgacgaccaagacgtcaacaagatcctc
atcgtcacccagaccccgccgtacctccgcaaacaccccggcggcgaccgcacaggaaac
cacgagtcccgggccaagatcacagccgatctggccaaggccatcaacgacgggctgtac
tactacgaacaggacctgtggaagggagaggagcagatcgagtgcagcaagcaggatgtg
gagaacttcaagaagttaaacgtcatcagtaaagacgagtttgacaccctcactcccaaa
gttcccatcgacccgaaccaggaagtccctcctcctcccatgacagtggagaccggatcg
gatctggctcgctctctccctacaacggtcccagaatcccccagcacttctcaaccccgt
acccccagaacacctcgcacgcctggacgccaggatcccaacaaaaccccacgattctac
cccgttatgaaggagagcggcgccattgatggacagatgccaagaaagaagaagacccgc
cacagctcaaaccccccgcaggaggcccacatcggttgggtgatggactcccgtgagcac
cggccgcgctctgcatccatcagcagctccaacgcttctccatcagaaggcgctccgctg
tcgggaagctacggctgcactccccagtctctgcccaagttctggcatccatcccacgag
ctgctgagagacaacggcttcacccagcagggataccacaagtaccgccgaaggtgcctt
aacgagaggaaacggttgggggtcggccagtctcaggagatgaacactctgttcaggttt
tggtccttctttctcagggacaacttcaacagaaagatgtacgaggagttcaaacagttt
gcacttgaagatgccaaagaaaattacaggtatggattggaatgcctcttcagatactac
agctacggtttggagaagagattcaggttagatctcttcaaagacttccaagaggagacc
ttgaaagactttgagaaaggtcagctgtacggactggagaagttctgggccttcctgaag
tattccaggataaagaaccagcccattgacccgaagctgcaggagcacctctcaaagttc
cggaacctggaggacttcagggtggtgcctccgatgggagaagagggcggcaggaggaga
tatccgtcatcctcggccggggatgaaggaaggcgccggagacacccttccaactctacc
tcaaaacccgcgcaggcctccaaatcctccaacgtgcccccccagtcaaccgccgcctcg
tcctccgcctccacacagagctcagccaaagacagcacccagaaatcgacggcgccgtcc
aaccacggcaaaaagcccgacagcagagcggcgaagaaagacggagtttcccccaacaaa
tga

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